Pairwise Alignments

Query, 620 a.a., Signal transduction histidine-protein kinase AtoS from Azospirillum sp. SherDot2

Subject, 784 a.a., PAS domain S-box protein from Paraburkholderia sabiae LMG 24235

 Score =  132 bits (332), Expect = 6e-35
 Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 37/384 (9%)

Query: 269 ALLDAKSLTENILHSIAD-GVIAVDRAGQVTALNPAAEAMIGVNATEVIGRPYESLFKPD 327
           A+++++     +++ + D  +  +   G +T  N  A  + G +A E+IG  +   + PD
Sbjct: 136 AVVESERRFRTLVNGVTDYAIFMLSPEGVITNWNAGARRIKGYDADEIIGSHFSRFYTPD 195

Query: 328 ----GRFASPLLDTLKTGR-QHVGVALDFPGTRQTLHLTVSSSVLRDSHGEAIGAVVVLK 382
               G     L    + GR +  G  +   G R   H+ + +  +RD  GE IG   + +
Sbjct: 196 DVEAGLPQRGLSIAAREGRFEAEGWRVRKDGKRFWAHVVIDA--IRDDTGELIGFAKITR 253

Query: 383 DLTEQ-------QRLRTQIMRADRLAALGELVAGLAHEVRNPLTSIRGFMQFLESSDDVA 435
           D+TE+       +  R  + +A ++ A+G+L  G+AH+  N L  +RG ++ L+S     
Sbjct: 254 DITERMEANRMLEETRKALFQAQKMEAVGKLTGGVAHDFNNVLQILRGNLELLDSRHHRD 313

Query: 436 EWQRYAPLIVRQVDSLNR---LVTELLEFGRPRPPAFLPVQLNDLIREVSLLAGRK--SN 490
            W R    I + +D+++R   L + LL FGR +P   + + L   +R +  L  R     
Sbjct: 314 AWSR--DRIFKAIDAVDRGSKLASHLLAFGRQQPLQPVAINLAAALRGMDDLLRRALGET 371

Query: 491 ARIALHPAPDLPLAEADGEALKQVMLNLIINAVQATSETGGIAIATAMAA---------- 540
            R+    A  L     D   L+ V+LNL INA  A  + G + +  + A+          
Sbjct: 372 IRVETVVAGGLWNTLVDIHQLENVILNLAINARDAMPQGGKMTMELSNASLDDEYVATVP 431

Query: 541 ---DGREAVITVSDDGEGIAPENLDKVFDPFFSTKP--QGTGLGLAMAHRIVDAHHGTIA 595
               G+  ++ ++D G G+  + L++ FDPFF+TKP  QGTGLGL+MA+  V    G I 
Sbjct: 432 DVLPGQYVMLAITDTGTGMPQDVLERAFDPFFTTKPEGQGTGLGLSMAYGFVKQSGGHIR 491

Query: 596 IASVPGAGTTVTLRIPILHNRAVD 619
           I S    GT V + +P     AV+
Sbjct: 492 IYSETDHGTIVRIYLPRSTQPAVE 515



 Score = 37.7 bits (86), Expect = 2e-06
 Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 288 VIAVDRAGQVTALNPAAEAMIGVNATEVIGRPYESLFKPDGRFASPLLDTLKTGR----- 342
           VI +   G +   N   E + G +A EVIG+P++    P+ R       +L   R     
Sbjct: 28  VIGLSADGTIMTWNRGGERIHGYSAEEVIGQPFDIFHTPEDRETGRAAVSLDIARRAGHT 87

Query: 343 QHVGVALDFPGTRQTLHLTVSSSVLRDSHGEAIGAVVVLKDLTEQQRLRTQIMRADR 399
           +  G  L   G+R   ++ +  ++L       +G   +++D+T+++R    ++ ++R
Sbjct: 88  ESEGWRLRKDGSRFWANVVI--TLLEGDDRRVLGFGKIVRDMTDKRRAHEAVVESER 142