Pairwise Alignments
Query, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 640 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2
Score = 405 bits (1041), Expect = e-117 Identities = 252/614 (41%), Positives = 337/614 (54%), Gaps = 68/614 (11%) Query: 19 GAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQAYHHALRLRPA 78 G AL G A A+ A ++ +A ++L EA RALG+P A + Y AL L PA Sbjct: 60 GVTALQAGAAEAASRWLRRALVVDRAQAYYRNSLGEAFRALGRPDKAREQYRLALTLNPA 119 Query: 79 YPKAWAGL----------ASLLLKSRRFKAA--------------------ARAAVR-AL 107 YP++ A L +LL + R + A ARAA R A+ Sbjct: 120 YPESLANLHRQPLPGDNAPALLERFCRLRPATASELLAVADSRLLAGRLADARAAYRAAV 179 Query: 108 ALDPGFAEAWSVAGSILLDRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPALP 167 AL+P +A+ G+ + + RRA+RL+ D+P W LA + E + Sbjct: 180 ALEPATVQAYVNLGATASREKNHAQAAAAYRRALRLSPDHPGAWNNLASAVWELNDGQGA 239 Query: 168 LACVRRAVALSPDRPAGYVNHAGLLIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVAT 227 + RR+VAL PD P Y N LG + +QA +G Sbjct: 240 VRFCRRSVALKPDHPDPYAN-------LGYVQRSQARNG--------------------- 271 Query: 228 LRGDFATALSLARRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVAR 287 DFA A +L RR+L + P+ +AL NL + G + A R LA +P+ AR Sbjct: 272 --DDFAEAATLCRRALRVNPSHVSALNNLGIVNLDLGQLDEAERLFNRTLAAEPKHPDAR 329 Query: 288 FNLSMVLLAEGDFAKGWRLYESRWRMERV-AYPAHAPRWTGGNPAGRSLLLVAEQGQGDT 346 FNLS+ LL G +GW YE+RW ++ W G G ++LL AEQG GDT Sbjct: 330 FNLSLALLKAGRLKEGWDHYEARWETGQLPTVNGQLRAWQGEPLNGATILLHAEQGHGDT 389 Query: 347 LQFVRYAPMLAALGAHVHLMVQPALVRLLSGLPGIASVRSLTEPPPACDACIPLLSLPLV 406 L FVRYAP++AA G V L VQP+L RL++G+PG+A+V +LT+P P + PL+SLP + Sbjct: 390 LHFVRYAPLVAAQGGRVVLAVQPSLKRLVAGMPGVAAVHALTDPFPKPEFHCPLMSLPRL 449 Query: 407 FGTGLATIPASVPYLSPPGQERAAWKRRLDGSPGGEGGLKVGLVWAGSAHDEQFVAHMVD 466 GT L TIP ++PYL PP + W G P GL+VGLVW+G A++ D Sbjct: 450 LGTELGTIPGAIPYLYPPAEAIGKWL----GQPLPGAGLRVGLVWSGDPRPGLLRANLTD 505 Query: 467 RRRSLPLAALAPLAGIPGVRFYSLQKGPPASEAR--TSGLDLVDWMDEVEDFADTAALVA 524 RRRS+ L LAPLA +P +RF +LQ G PA++ +G+D+ D M + DFADTAALV Sbjct: 506 RRRSMSLHDLAPLAEVPDLRFVNLQMGGPAAQLTEPPAGMDIHDPMGAITDFADTAALVM 565 Query: 525 ELDLVISVDTSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYPTMRLFRQDRPGDWP 584 LDLVI+VDTSV HL GALG+PVW++SR+D CWRWL++R D+PWYPTMRLFRQ PGDW Sbjct: 566 RLDLVITVDTSVAHLVGALGKPVWVMSRYDGCWRWLQDRDDTPWYPTMRLFRQTAPGDWT 625 Query: 585 PVILRVRTALERWA 598 VI RV AL + A Sbjct: 626 TVIRRVADALRQLA 639