Pairwise Alignments

Query, 339 a.a., Putative aliphatic sulfonates-binding protein from Azospirillum sp. SherDot2

Subject, 341 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 26/337 (7%)

Query: 3   RIFAAALCAALYGSIALLAGIAPAGAATTGDSRPLRVGWVFAMANAPALVADRKGFYAEE 62
           R+ A  + AA+  + +    + PA A     ++ +R      +      +   KGF+ +E
Sbjct: 17  RLAAFGVAAAILAACSRTEPV-PAPAPAAEAAQKVRYAGYPGVTGLGVQLGIEKGFFKDE 75

Query: 63  GLTVEAKPFGDGPVIQQALAAGELDVAYIGAPPVYQWAARGLDSRILAKV-NYGQAAVIA 121
           GL +E   F +       LA+G++D+A          A +G+   I+A +  +     + 
Sbjct: 76  GLALE---FINTQDAVSGLASGDIDIADWNTTGAIVAAGKGVPLTIVASMFRHVGPFYLV 132

Query: 122 NNPAIARLSDLRGRKVAGVARGSGMDVLLRGVVLKEAAGLDPDRDLSVVSMPVGNMNAA- 180
             P +A +S L+G+ V   A G+G+DV  R ++ KE   LD       VS     +NAA 
Sbjct: 133 GAPDVASVSALKGKTVGAAAFGTGLDVYARTILSKEGVPLDS------VSFVANGVNAAA 186

Query: 181 ---LDSGTVDAAFTWEPFISQQVLRGSSHVLFDVNQALPGYPWYVVMAPKKTLADRPDDV 237
              +++G+V A    EPF S     G   VL      LP +   V++A  K +A  P  +
Sbjct: 187 LATVENGSVSATIIHEPFASLAEASGKGKVLAAGYDYLPRFHTGVIVANNKFIASSPRLL 246

Query: 238 VKLLRAHAKAIAWLSDHPAEGDALIAEAFKLEPVKRADGTEIAPAAVAAEARKRLGWSDR 297
            K LRA+ ++  +   H  E  A  A+   ++P       ++  AAV  E      W++ 
Sbjct: 247 EKFLRAYFRSNEYAKAHLDEYKAFYAKRLSVDP-------KVVDAAVRRELPI---WAND 296

Query: 298 LEESDLAFIQRLMDTSLALGFIPAPMKAADIVDSSYL 334
            + S L  +Q      LALGF      AA  V+ +++
Sbjct: 297 PKVS-LDEVQETQQVQLALGFQKEIYDAAKFVNLAFV 332