Pairwise Alignments

Query, 1105 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 1111 a.a., type VI secretion protein VasK from Pseudomonas simiae WCS417

 Score = 73.2 bits (178), Expect = 1e-16
 Identities = 85/323 (26%), Positives = 138/323 (42%), Gaps = 38/323 (11%)

Query: 123 RGDIPWFLAFGVGGP---ALLATD--PTHVRWPEDG--NTENGC-WWFCEGAAILHAGA- 173
           R ++PW+L  G  G    +LLA    P+    P+       + C W+F E A ++ A   
Sbjct: 124 RDELPWYLLIGEQGSGKTSLLAASGLPSPFDHPDAAPLGAASWCDWYFAEDAVLVEAAGR 183

Query: 174 --DSADGTKLDASWPSLVAAVRKRPMRRPLDGILLLVGADELRAAAEREAPRRALAKRAE 231
                D +   A W +L+  ++ R   RPL+G+++ + AD L ++ E +     L + A 
Sbjct: 184 YLGQPDPSVDAAGWSTLLDLLKWRRRSRPLNGVVVTLSADTLSSSNEHD-----LERHAR 238

Query: 232 SLRARLRSIRDELGMVCPVHVAVVRAESLDGFGDLCATIPAAMLDSVLGWTSPYDWLAPF 291
            +R RL+ I+  L +  PV++ + +++ L GF +          + VLG     D     
Sbjct: 239 HVRTRLQDIQQTLHVDVPVYLVLTQSDRLAGFAEFFDAQQGDGTEQVLGGDLGTD----- 293

Query: 292 EPARMAEAFDAIQSDLALLEADALAGVTAAGTACVRLPLL--PASLETLRHPLALFLDGA 349
               +A+  D  ++ L  L  D +  +        R  +L  P  +  +   L LF++ A
Sbjct: 294 ----LAQVRDVFENLLQRLGGDLIPRLHQERNVERRGHMLDFPRQVARIGDALCLFIEAA 349

Query: 350 LGGDEASEPFPLRGIALTGACATATGGRRPAFARDLLPGRAFAE---PGYGRPSETAFLQ 406
              +       LRG  LT  CA  T   RP F + L     FAE    G   P      +
Sbjct: 350 FSVNRNQPINALRGFYLT--CA-KTVDVRPHFVQGLFKRVIFAEADQAGLLTPE-----R 401

Query: 407 GRRHRRIAQATLAASVTVLSVAA 429
            R HRR     LAA+V + +V A
Sbjct: 402 QRIHRRHGWMALAATVVIGTVGA 424