Pairwise Alignments

Query, 252 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 241 a.a., ABC-type amino acid transport/signal transduction system, periplasmic component/domain from Pseudomonas sp. S08-1

 Score =  144 bits (364), Expect = 1e-39
 Identities = 82/236 (34%), Positives = 128/236 (54%), Gaps = 3/236 (1%)

Query: 17  LALLALLGLCTPARAEYWTVASEDHFPPYNYSFNGNRT--GIDTEIVNALLKELNVTPVH 74
           L+L+ LL       AE W V  ++ F PY++    + T  G+D ++V A++KE  V    
Sbjct: 4   LSLILLLLFSPLLAAETWRVVGDEQFAPYSFVTQEDDTPRGVDVDLVEAVMKEAGVAYSL 63

Query: 75  RPLSWTEVVQSMDENTADIGFQFIASPTRFAQYNMIGPFRTGTTVFMV-RKDSNITFDRL 133
           R   W  V + ++ N A++ FQF  +P R AQY + GP RTG+TVFM   K S   +  L
Sbjct: 64  RLYPWERVKRMLERNEAEMAFQFAGTPERKAQYELAGPIRTGSTVFMTSHKISLQDWKTL 123

Query: 134 EDLTSYRIGVVDGFSYAADFDAATYLEKVASSSNVVNFRRLILGRVDVIVGDLHVLNYMA 193
           +D T + IG V G++Y ++FD A      ++ +       L+ GR+D+IVGD   L Y  
Sbjct: 124 DDFTPFVIGQVRGYAYESNFDKADLRRDTSAQNPRQLVSMLLAGRIDIIVGDRIQLLYFI 183

Query: 194 KQDGRLKDVRVLPKPVGLIPRYIALPKARKEKAERLQAAFVKLRDNGTIARILDGW 249
           ++      VR+LP P+  +PRY+A  K   ++A +   A  K+R +G + +IL  W
Sbjct: 184 QEQRAQSSVRLLPTPLVEMPRYVAFAKGDSQRARQFGTALEKVRASGELEKILRKW 239