Pairwise Alignments

Query, 313 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 327 a.a., helix-turn-helix domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  102 bits (253), Expect = 2e-26
 Identities = 82/299 (27%), Positives = 129/299 (43%), Gaps = 18/299 (6%)

Query: 23  ALVGWTQHYRQLQPGRFLGRLKEVVAPGISVFREDTNLRLHQHTAPPPDTLVVAVPLPGS 82
           AL GW Q Y Q+  GRF   +K+     I VF E  N R+ Q    PP   +V +PL G 
Sbjct: 24  ALHGWDQEYVQVGCGRFSSTVKQASVDDIHVFHESANARIVQRGRLPPARTIVGIPLTGK 83

Query: 83  APARLDGRPVGENEVLLLRGGTLSEFLCNGPMSVLALAIDRRRAEQLRVTVPDAAEVPAS 142
                    +G   ++    G   EF  + P  +L + +    A  +   + +AA   AS
Sbjct: 84  GSFTFRRSLLGPGRLVCCSDG--KEFDLHAPDDMLLIGVVI--APVMLQNIAEAAGFDAS 139

Query: 143 SFS------------YARAG-ELRAVLQCVLAASPV-LLEQSEVFLPLLDQCVSVVEAGI 188
           +FS             +R G  +   L+C L         QS      ++  ++ +    
Sbjct: 140 TFSRQMDVLEVPKPALSRTGLRIATTLECALQTGATGNSAQSRELAGEIEDALADLFTYH 199

Query: 189 MQAVRPPTVGHSQRQKFVRQFRDHVEAHPDDRLSVAQVAQAIGVTTRMLEYSFADVMGIS 248
           +   +   + H+     VR+  D+V A  D+ + +  ++  +GV+ R ++ SF  V   S
Sbjct: 200 VAHDKSRELTHACHADIVRRCHDYVLASGDESIDIHSLSATLGVSRRTIQNSFRAVTQTS 259

Query: 249 PKDYLKMVRLNAARRALRVADPRTVTVAEIAMDHGFWHLGRFSAYYSEMFGEKPSDTLR 307
           P  YL+ VRL   RR L       +++++ A   GF HLG F+  Y   FGE PS T R
Sbjct: 260 PLVYLRAVRLAQVRRLLTSTPADALSISDAAGRWGFQHLGHFAQSYKAQFGELPSHTPR 318