Pairwise Alignments

Query, 539 a.a., Periplasmic oligopeptide-binding protein from Azospirillum sp. SherDot2

Subject, 558 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Escherichia coli ECRC101

 Score =  329 bits (843), Expect = 2e-94
 Identities = 192/534 (35%), Positives = 299/534 (55%), Gaps = 26/534 (4%)

Query: 1   MTELKKKVSAVMVAAGL--ALFAGTAAQAATV-----------LNRGNGGEPSTLDPHRT 47
           MT + K+    +VAAG+  AL AG  A AA V           L R NG E  +LDPH+ 
Sbjct: 16  MTNITKRS---LVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKI 72

Query: 48  DGRIESNILRDLFEGLVVYGPDGRILPGVAESWQVSEDGKLYSFQLRADARWSNGDAVTA 107
           +G  ESNI RDLFEGL+V   DG   PGVAESW  ++D K+++F LR DA+WS+G  VTA
Sbjct: 73  EGVPESNISRDLFEGLLVSDLDGHPAPGVAESWD-NKDAKVWTFHLRKDAKWSDGTPVTA 131

Query: 108 EDFVYSLRRALTPKDGIQPSSNMRV--IKGAAAVIDGTKPADTLGVAAPNPRTVTIALEA 165
           +DFVYS +R++ P      +S ++   I G   +++G KP   LGV A +  T+ + L  
Sbjct: 132 QDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSE 191

Query: 166 ATPYFLDLIAADNSALPVHRGTVESQRERWTDPGKMVSNGAYVLEEWRARQQIGLGRNAN 225
             PYF  L+   +++ PV +  +E   E+WT PG +V+NGAY L++W   ++I L R+  
Sbjct: 192 PVPYFYKLLVHPSTS-PVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPT 250

Query: 226 FHGRSGVSIDKVNFFPIDDSAEEVDRFKAGTLHLTYE-VPQDRVKWISLTEPKVFWNRPF 284
           +   +   I++V + PI     +V+R+++G + +TY  +P +  + +    P      P+
Sbjct: 251 YWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPDEVHVDPY 310

Query: 285 LATYYYAFNLTVEPFKSNRDLRRALSLAVNRENIVDKVTRAGETPAYGLVPPIVPNYRRQ 344
           L TYYY  N    PF   R +R AL L ++R+ IV+KV   G+ PAYG  PP     +  
Sbjct: 311 LCTYYYEINNQKPPFNDVR-VRTALKLGMDRDIIVNKVKAQGDMPAYGYTPPYTDGAKLT 369

Query: 345 TADFIAEPMDNRLREARRLFSTAGFSPMQPLAVEILYNQSENNRVIADAVISMWQDAFGK 404
             ++     + R  EA++L + AG++  +PL + +LYN S+ ++ +A A  S+W+     
Sbjct: 370 QPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNI-- 427

Query: 405 GIQVKPVSVERTDYLKRRARRDFQIVRAAWIGDYADPTVFLNLMLSTALPPRNDPGYRSR 464
           G+ VK V+ E   +L  R +  F + RA W  DY +PT FLN MLS +    N   Y+S 
Sbjct: 428 GVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNS--SMNTAHYKSP 485

Query: 465 KYDDLLAKAAASEDAAQRSSLLGQAEKAMIDDDPVIPIYHFSTKSLVSQQIKGW 518
            +D ++A+     D AQR++L  +AE+ +  D  ++P+Y++    LV   + G+
Sbjct: 486 AFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 539