Pairwise Alignments

Query, 276 a.a., Trehalose transport system permease protein SugB from Azospirillum sp. SherDot2

Subject, 280 a.a., putative sugar ABC transporter permease from Escherichia coli BL21

 Score =  150 bits (380), Expect = 2e-41
 Identities = 90/279 (32%), Positives = 156/279 (55%), Gaps = 10/279 (3%)

Query: 3   RPLRKLLDKAGMAVCVLLLVSPALLFFIWMLSLSLKFEIDNGAYPPILIPDRFAWKNYTT 62
           R L ++    G+A+ +++ + P   FF+ ML  S K   +  +  P L+P ++  ++Y  
Sbjct: 6   RTLSRIGFYCGLALFLIITLFP---FFV-MLMTSFKGAKEAISLHPTLLPQQWTLEHYVD 61

Query: 63  IFEGN--SFLLYFWNSMIVTGAATLFALLVGVPAGYGIARMRAHKSAVV---IMIARMTP 117
           IF      F+ YF NS++V+  +++ A+ +G+   Y ++R+R      +        M  
Sbjct: 62  IFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFS 121

Query: 118 GLSFLIPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFETTPMELEEAAMVDGA 177
           G+  ++PLF +   LG+  T    II  +  T+P  ++++  YF+T P E+EEAAM+DG 
Sbjct: 122 GILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGL 181

Query: 178 TRWQIFAKVALPIAKPGIVVAFILSVIFSWNNFVF-GIVLASRETRTLPVAVYNMLSFEQ 236
            R QI  ++ +P+A  G++  F+   + +WN+++F  I L+S    TLPV +  + S   
Sbjct: 182 NRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPD 241

Query: 237 VSWGPLAAAALVVTLPVLILTVAAQRQIVAGLTAGAVKG 275
             WG + AA+LV  LPV+I+   ++R I +GLTAG VKG
Sbjct: 242 YIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG 280