Pairwise Alignments

Query, 353 a.a., HTH-type transcriptional regulator DegA from Azospirillum sp. SherDot2

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECOR38

 Score =  113 bits (282), Expect = 8e-30
 Identities = 84/317 (26%), Positives = 154/317 (48%), Gaps = 11/317 (3%)

Query: 20  SLADIAAEAGVSVSTVSR-IANGDLGRASAATVAKVQRLIAERGYRPNPVGRSLRGGDSR 78
           ++ D+A +A VS +TVSR + N D  + S AT  +V++   E GY P P+GR+++  +SR
Sbjct: 11  TMKDVALKAKVSTATVSRALMNPD--KVSQATRNRVEKAAREVGYLPQPMGRNVKRNESR 68

Query: 79  LVAMLAPNLDNPAMAAIAASTEAALRAAGYVMILCDTHDRPDLQDEYLRAMRSRFAEGFI 138
            + ++ P++ +P  + I    E      GY++++ D   +   +  ++  + ++  +G +
Sbjct: 69  TILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGML 128

Query: 139 VVSAVASPELEASLDRRE---PIVFVNRRNPYGGGPFIGIDNRQAGADAADHLLACGVRA 195
           ++ +      +AS++ +    P+V  N   P    P + IDN  A  DA ++L   G + 
Sbjct: 129 LLGSRLP--FDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKR 186

Query: 196 PAVIHPADLSSTIRERVEGFLDRLEERRPGLAVR-RCDGPGGNHLDCGYAAAKRLTADGG 254
              I   +       R++G++  L  RR G+ V  +    G    + G  A ++L     
Sbjct: 187 IGCIAGPEEMPLCHYRLQGYVQAL--RRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQ 244

Query: 255 WPDGILCPSDLMAYGLFRAAGEQGVRIPDDCRPVGIDDNDLNDWIAPWLSSVKIPYQRFG 314
            P  + C SD+MA G    A  QG+++P+D   +G D+ DL  +  P L+++  P    G
Sbjct: 245 PPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIG 304

Query: 315 DAVVASLRDLRGGNSVG 331
              +  L D   G  VG
Sbjct: 305 REAMLLLLDQMQGQHVG 321