Pairwise Alignments

Query, 484 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 415 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  100 bits (249), Expect = 9e-26
 Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 31/336 (9%)

Query: 15  ILFPFAAFAGQA-PAAASDPDIPISGRDRVYAAEQFSNTVSVSDPSTNRLLGVIKLGDPQ 73
           IL   AA A  A PA A+ P        + Y      +TVSV D ++ R++  +      
Sbjct: 10  ILVVLAALAASAGPALAAGP--------KAYVGNFKDSTVSVIDTASERVVATL------ 55

Query: 74  PGNLSPLYKGQVLVHGMGFSPDHKTLAVVSIGSNSVTFIDTATNMVRHTTYVGRSPHEAF 133
                P+  G     G+  +PD +++ V    +++V+ ID  ++ V     VG+ P    
Sbjct: 56  -----PVAAGP---DGIVLTPDGRSVFVSGSSASAVSEIDATSDRVTRAIDVGKGPQGLA 107

Query: 134 FTPDGKEVWVTVRGEDYISVLDTTSFEEKTRIKVPAGPGMQIFSPDGRYGYICSS--FNP 191
            T DGK + V V G+D ++ +DT++      + VP  P      PDGR  Y+ S    + 
Sbjct: 108 MTADGKWLLVAVNGDDRVAFVDTSAHGVSATVPVPK-PHTIAIRPDGRQAYVASQEPGHF 166

Query: 192 ETVIVSVADHRILGHVKQESPFCPNIAASPDGKQVWFTLKDIGKTQVFSAEAPFDLIRTI 251
             V++ +A   ++  +  + P   ++   PDGK ++ TL  +   QV  A         +
Sbjct: 167 AVVVIDMATRAVVTQIPLDKP-PRDLEFDPDGKALYLTLAGVPAVQVLDATTN-QWGAPV 224

Query: 252 DTGPITNHVNLVTNRNGSFAFVTVGGLNEVKVFRTDDFEQVATIPVGNLPHGIWPSGDGT 311
            TG ++ H+        S   V V G  EV +F       V +I VG  PH +  S DG 
Sbjct: 225 PTG-VSPHIAQHFAGMAS-GVVVVPGPGEVMLFDPAARTSVRSIGVGKQPHWLDLSADGR 282

Query: 312 RVYVGLENADQFAVIDTLTNKVIATIPIGQAPQAVA 347
           +++V  E ++  +V+D L    + T+ +G AP+ +A
Sbjct: 283 KLWVSNEGSNDVSVVD-LAGGAMHTVAVGNAPRKIA 317



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 71/275 (25%), Positives = 107/275 (38%), Gaps = 33/275 (12%)

Query: 169 AGPGMQIFSPDGRYGYICSSFNPETV-IVSVADHRILGHVKQESPFCPNIAASPDGKQVW 227
           AGP +      G   Y+  +F   TV ++  A  R++  +   +     I  +PDG+ V+
Sbjct: 21  AGPALAA----GPKAYV-GNFKDSTVSVIDTASERVVATLPVAAG-PDGIVLTPDGRSVF 74

Query: 228 FTLKDIGKTQVFSAEAPFDLI-RTIDTGPITNHVNLVTNRNGSFAFVTVGGLNEVKVFRT 286
             +     + V   +A  D + R ID G       L    +G +  V V G + V    T
Sbjct: 75  --VSGSSASAVSEIDATSDRVTRAIDVGK--GPQGLAMTADGKWLLVAVNGDDRVAFVDT 130

Query: 287 DDFEQVATIPVGNLPHGIWPSGDGTRVYVGLENADQFAV--IDTLTNKVIATIPIGQAPQ 344
                 AT+PV   PH I    DG + YV  +    FAV  ID  T  V+  IP+ + P+
Sbjct: 131 SAHGVSATVPVPK-PHTIAIRPDGRQAYVASQEPGHFAVVVIDMATRAVVTQIPLDKPPR 189

Query: 345 AVAYVPN------------AVPEGDGLQNL----VPLGKAGEAAHLRLAAAGGKGKT--P 386
            + + P+            AV   D   N     VP G +   A      A G      P
Sbjct: 190 DLEFDPDGKALYLTLAGVPAVQVLDATTNQWGAPVPTGVSPHIAQHFAGMASGVVVVPGP 249

Query: 387 STVSLFDQGLTQVLQASVTGLEPKKAYVLALSRKV 421
             V LFD      +++   G +P    + A  RK+
Sbjct: 250 GEVMLFDPAARTSVRSIGVGKQPHWLDLSADGRKL 284



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 14/135 (10%)

Query: 310 GTRVYVGLENADQFAVIDTLTNKVIATIPIGQAPQAVAYVPNAVPEGDGLQNLVPLGKAG 369
           G + YVG       +VIDT + +V+AT+P+   P  +   P      DG    V    A 
Sbjct: 28  GPKAYVGNFKDSTVSVIDTASERVVATLPVAAGPDGIVLTP------DGRSVFVSGSSAS 81

Query: 370 EAAHL-----RLAAAGGKGKTPSTVSLFDQGLTQVLQASVTGLEPKKAYVLALSRKVDGS 424
             + +     R+  A   GK P  +++   G  + L  +V G + + A+V   +  V  +
Sbjct: 82  AVSEIDATSDRVTRAIDVGKGPQGLAMTADG--KWLLVAVNG-DDRVAFVDTSAHGVSAT 138

Query: 425 GPLEGLSNFMTNPAG 439
            P+         P G
Sbjct: 139 VPVPKPHTIAIRPDG 153