Pairwise Alignments

Query, 286 a.a., IS3 family transposase ISMdi5 from Azospirillum sp. SherDot2

Subject, 288 a.a., IS3 element protein InsF (NCBI) from Escherichia coli BW25113

 Score =  243 bits (619), Expect = 5e-69
 Identities = 132/284 (46%), Positives = 177/284 (62%), Gaps = 3/284 (1%)

Query: 1   MRFRFIEDHRDEFPTRLMCSVLGVSSSGYYAWRGRPE--SQRAAANRQLLVEVRRVHGRH 58
           M++ FIE H+ EF  + MC VL V+ SG+Y W  R    S R    +     V     R 
Sbjct: 1   MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRS 60

Query: 59  HGRYGSPRVHAALRAEGVAASRGRVARLMRRHGIRGAASRRFRPVTTNSRHGLPVAPDLL 118
             RYG+PR+   LRA+G   +   VA  +RR G+R  ASR+F PV+  + HGLPV+ +LL
Sbjct: 61  KQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRA-HGLPVSENLL 119

Query: 119 GQAFLVAEPNRVWLADITWLPTAEGWLYLAAVLDLATRKIVGWAMRDHMRAELATSALVM 178
            Q F  + PN+ W  DIT+L T EGWLYLA V+DL +R ++GW+M   M A+LA  AL M
Sbjct: 120 EQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQM 179

Query: 179 AIQRQRPPVGLIQHSDRGSQYASRNYRDLLQAAGMRQSMSRKGCCYNNAPMESFFHTLKV 238
           A+ R++ P  +I H+DRG QY S +Y+  L+   +R SMS KGCCY+NA +ESFFH+LKV
Sbjct: 180 ALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKV 239

Query: 239 ELVHRTRFETRDQARREVFAYIETYYDRQRAHSAIGYITPEQAE 282
           E +H   F +R+  R  VF YIE  Y+R R HS  G ++PEQ E
Sbjct: 240 ECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFE 283