Pairwise Alignments

Query, 286 a.a., IS3 family transposase ISMdi5 from Azospirillum sp. SherDot2

Subject, 284 a.a., IS3 family transposase ISEc16 from Escherichia fergusonii Becca

 Score =  235 bits (600), Expect = 7e-67
 Identities = 128/284 (45%), Positives = 174/284 (61%), Gaps = 7/284 (2%)

Query: 1   MRFRFIEDHRDEFPTRLMCSVLGVSSSGYYAWRGRPESQRAAANRQLLVEV--RRVHGRH 58
           M++ FIE+HR EF  + MC VL V+ SG+Y W  R          +L  +    +     
Sbjct: 1   MKYVFIENHRAEFSIKAMCRVLRVARSGWYVWLWRRHQMSLRQQFRLTCDAAFHKAFFEA 60

Query: 59  HGRYGSPRVHAALRAEGVAASRGRVARLMRRHGIRGAASRRFRPVTTNSRHGLPVAPDLL 118
             RYG+PR+   +    +      +A  +RR G+R  ASR+F PV+  + HGLPV  +LL
Sbjct: 61  KQRYGAPRLADEMPEFNIKT----IAASLRRQGLRAKASRKFSPVSYRA-HGLPVLENLL 115

Query: 119 GQAFLVAEPNRVWLADITWLPTAEGWLYLAAVLDLATRKIVGWAMRDHMRAELATSALVM 178
            Q F  + PN+ W  DIT+L T EGWLYLA V+DL +R ++GW+M   M A+LA  AL M
Sbjct: 116 EQDFSASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSLRMTAQLACDALQM 175

Query: 179 AIQRQRPPVGLIQHSDRGSQYASRNYRDLLQAAGMRQSMSRKGCCYNNAPMESFFHTLKV 238
           A+ R+R P  +I H+DRG QY S +Y+ LL+   +R SMS KG CY+NA +ESFFH+LKV
Sbjct: 176 ALWRRRRPESVIVHTDRGGQYCSGDYQALLKRHNLRGSMSAKGYCYDNACVESFFHSLKV 235

Query: 239 ELVHRTRFETRDQARREVFAYIETYYDRQRAHSAIGYITPEQAE 282
           E +H  RF +R+  R  VF YIE  Y+R R HSA G ++PEQ E
Sbjct: 236 EYIHGERFSSREIMRATVFNYIECDYNRWRRHSACGGLSPEQFE 279