Pairwise Alignments

Query, 335 a.a., Catabolite control protein A from Azospirillum sp. SherDot2

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score =  144 bits (364), Expect = 2e-39
 Identities = 109/333 (32%), Positives = 167/333 (50%), Gaps = 11/333 (3%)

Query: 8   ATAVDVARLAGVSQSAVSRCFTEGASVSAETRSRVLEAARRLSYRPNAIARSLTTRRTNL 67
           AT  DVARLAGVS S VS    +   VS    ++V  A + L+Y P+A+ARSL   +T+ 
Sbjct: 2   ATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHT 61

Query: 68  IGVVMGDLDGPFQPYLFETLTRGLASRGKQPLL--VRGDPADALDGTAMAALDYQVDAVV 125
           IG+++     PF   L   + R    RG   +L    GD    ++      +  +VD ++
Sbjct: 62  IGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGD-EQRMNRNLETLMQKRVDGLL 120

Query: 126 VTAGSVSPAAIRGLMAL--GVPLLLYGRAVEADGVDSICCDNP-LGARLVAQALVAAGHR 182
           +        + R +M     VP ++   A   DG   +  DN  LG  L  Q L+  GH 
Sbjct: 121 LLCTETHQPS-REIMQRYPTVPTVMMDWA-PFDGDSDLIQDNSLLGGDLATQYLIDKGHT 178

Query: 183 RIAYLGGRPTAFSEQERGSAFRAALAELGMPLAAAGE--GDYSYDSGHREALRLLAGPDR 240
           RIA + G       + R   +RAA+   G+ +    E  GD+ ++ G     +LL+ P R
Sbjct: 179 RIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLR 238

Query: 241 PDALFCGNDAMAFGALDAARTALGLRVPDDLSIVGFDDVPMAGWPSFSLTTIRNPVEEIV 300
           P A+F GNDAMA G   A   A  L+VP D++++G+DD+ +A + +  LTTI  P +E+ 
Sbjct: 239 PQAVFTGNDAMAVGVYQALYQA-ELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELG 297

Query: 301 ATLLDMLERRLAEPDAPPVLHRPPPLLVRRGSA 333
              +D+L  R+ +P       +  P+L+ RGSA
Sbjct: 298 ELAIDVLIHRITQPTLQQQRLQLTPILMERGSA 330