Pairwise Alignments

Query, 309 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 302 a.a., ABC spermidine/putrescine transporter, inner membrane subunit from Pseudomonas fluorescens GW456-L13

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 20/273 (7%)

Query: 25  APALPAARTVPDWLWGVLLVLPALAMVALFFLYPLGLSAVSAFQGRDG----GWTLANIA 80
           A  + AAR V       L + P++  + +     L +  +S   G  G    G++LA+ A
Sbjct: 12  AAPVRAARGVSPTARAWLFLTPSMLFLGVLIAASLLVLRMSV--GTKGAEWSGFSLASYA 69

Query: 81  KAFELYSL-DMAFTLAIVLLSSALVAVLSVAIGGYLTLGENRLAVTLLRWLYRWPLFIPF 139
           +  E Y L  +  TL + L+S+ +  +L++ +   ++    RL    +R ++   + +P 
Sbjct: 70  QLLEPYYLKSLMLTLRLALISAVIAVILAIPVAYTMS----RLTSPFVRRIFLAAVLLPL 125

Query: 140 IVAAQMMRSF-----LAKNGLMNNLLIGGGVIE-PLQAASLLDWRGVVVTFVWKQTPFVA 193
           +V   +++S+     L   G++N  L+G G+I+ P+    L +  GV++  V    P   
Sbjct: 126 LVNL-LLQSYGWLVILGPGGMLNQALMGLGLIKRPIML--LYNQNGVLMGLVQTAFPLAV 182

Query: 194 LMVAGAMASLDRSTIEAARDLGAGRLRILAEIVVPQVRPTLVVGLILSFVTMLSVMSVPM 253
           L +A AM  + RS  EAA  LGA R ++  ++V+P   P ++ G  L F    S   VP+
Sbjct: 183 LPIASAMRGVARSYEEAAATLGASRFQVFRQVVLPMSLPGIITGATLVFAYNASSFVVPL 242

Query: 254 MINPNSPTMITVDMAYRINAHGDYGVANALGFV 286
           ++      M+ V +  +I    ++  A+A G V
Sbjct: 243 LLGGRRVPMLAVMVHDQIAPLMNWPAASAAGVV 275