Pairwise Alignments

Query, 309 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 300 a.a., Putrescine transport system permease protein PotH from Azospirillum sp. SherDot2

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 84/306 (27%), Positives = 134/306 (43%), Gaps = 39/306 (12%)

Query: 1   MSAPLPTEAAGRPAALPR--SRGGDGAPALPAARTVPDWLWGVLLVLPALAMVALFFLYP 58
           MSA L   A G P    R  +RG DGA                LLVLP +A++   F+YP
Sbjct: 1   MSAVLEGRAEG-PTLRQRLAARGIDGA---------------TLLVLPCVALILGLFIYP 44

Query: 59  LGLSAVSAFQGRDGGWTLANIAKAFE---LY-----SLDMAFTLAIVLLSSALVAVLSVA 110
                + +F+ +DG     N A+ F    LY     +L +AF + ++ L  A+     V 
Sbjct: 45  FLYGLMLSFEPKDGS-LFGNYARFFSDPFLYGTIFKTLRLAFPVTLLNLLIAIPIAFRVR 103

Query: 111 IGGYLTLGENRLAVTLLRWLYRWPLFIPFIVAAQMMRSFLAKNGLMNNLLIGGGVIEPLQ 170
           +     +   RL  TLL      P+ +  ++ A+ M  +    G  N  L+  G++    
Sbjct: 104 L-----MRRQRLLTTLLVL----PITLGTVLVAEGMLFYFGPQGWFNRALMAVGLLST-P 153

Query: 171 AASLLDWRGVVVTFVWKQTPFVALMVAGAMASLDRSTIEAARDLGAGRLRILAEIVVPQV 230
            + L  + GV ++ V    PF  L+    +  +D S   AA  LGAG      E+ +P +
Sbjct: 154 ISVLNGYWGVFISLVLTGFPFTFLLTLSYVTGIDPSLENAAATLGAGPAARFREVFLPLL 213

Query: 231 RPTLVVGLILSFVTMLSVMSVPMMI-NPNSPTMITVDMAYRIN-AHGDYGVANALGFVSY 288
            P L +   LSFV   SV+   +++ +P   T +    AY+      DY +A+A+  +  
Sbjct: 214 IPGLAITFCLSFVQAYSVLPSAVLVGDPAGATRVISIAAYQAAFEEYDYSMASAIAMIMG 273

Query: 289 AMAGLV 294
           A+  LV
Sbjct: 274 AVQLLV 279