Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma factor FecI from Azospirillum sp. SherDot2

Subject, 173 a.a., RNA polymerase sigma factor from Pseudomonas fluorescens SBW25

 Score =  112 bits (281), Expect = 2e-30
 Identities = 62/158 (39%), Positives = 93/158 (58%)

Query: 9   LLGLLIVHYEEMTGHLARRLGSLCLAEDVVQDTYLRLRSLAALPEIDNPRSYLFRMADNI 68
           L GL + H + + G+LAR++    LA D+VQ+++LRL    A   IDN + YL+R A N+
Sbjct: 6   LKGLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNL 65

Query: 69  ALDRLRAETRRGRRFAPAELGMERPLEEPDAETALEHKQRLERLSHALAELPPRCREVFL 128
            +D +R E RR     P E   E   +    E     +Q+ + L  ALAELP R +++F 
Sbjct: 66  LIDHIRQEARRKTDSVPHEALAEIEDDVAGLEAQAMAQQQRQALKQALAELPERTQQIFR 125

Query: 129 LHKFDGLSHADIAARLGISRSMVEKHVMKALAHCRDRL 166
           L++ +G++HA +A  L IS S V+KH+ KALA+   RL
Sbjct: 126 LNRIEGMTHAQVARHLDISDSSVQKHLAKALAYVMQRL 163