Pairwise Alignments

Query, 174 a.a., ECF RNA polymerase sigma factor SigE from Azospirillum sp. SherDot2

Subject, 162 a.a., putative RNA polymerase sigma factor FecI from Pseudomonas sp. RS175

 Score = 80.5 bits (197), Expect = 1e-20
 Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 7/159 (4%)

Query: 9   ARKIAELFDAHRLRVERAIARRTGDPQTAGDLAQDAFLRLARLPDGEAVQNPAGLLYVVA 68
           A  +  L+ AH   +   + RR G P +A DLAQD F+R+    D + +  P   L  +A
Sbjct: 4   APTVEVLYTAHHNWLNGWLRRRLGCPDSAADLAQDTFIRVLTARDPQPILEPRAFLTTIA 63

Query: 69  DRIALDHCRAARRQRL---REAGPPDDDLPAAGPAADALVERTQTMVRLRGAIDALPPKT 125
            R+  +H R    +R      A  P+   P+    A  L    QT++ L   +D LP   
Sbjct: 64  KRVLFNHYRRQDLERAYLEAVAQLPEQVAPSEEDRAIIL----QTLLELDQLLDGLPRAV 119

Query: 126 REVFLLYHVEGLPYRAIGERLGISPRTVEYHLRTALEQC 164
           +  FLL  V+GL Y  I   LGIS  TV+ HL  A  +C
Sbjct: 120 KRAFLLAQVDGLTYNEIARELGISLATVKRHLNKAAMRC 158