Pairwise Alignments

Query, 329 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

Subject, 331 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score =  189 bits (479), Expect = 1e-52
 Identities = 110/312 (35%), Positives = 172/312 (55%), Gaps = 18/312 (5%)

Query: 21  EHVQRYSTLVVLVAMFLVFSLGVDRFLTGQNLLNIAQQISMLTIVGAGLTFGFAAREMDL 80
           E + ++  L+ +VA+  +F +  D FL   N++NI + I+++T++  G++   +    DL
Sbjct: 19  EFLYKWGMLLTVVALIALFGIASDNFLDPNNIINILRSIAIVTVIAIGVSISLSVGGFDL 78

Query: 81  SVGYTVGLAGVLVPLLLV-KGVPLPLALLAGLGAGLAVGAVNALLVTLVGIPSLIATLAV 139
           SVG T  LA  LV  L V  G     A++  L     VG  NA L+ ++ IP ++ATLA 
Sbjct: 79  SVGSTASLANALVVSLFVWYGFGTTGAIVLTLLICTLVGLFNAFLIVVLKIPDMLATLAS 138

Query: 140 GSILYGI------------NFLMTGGRAIYGGLDEAYLWLGQGRVAGIPVLAFFMLAAVL 187
             ++ G+            N L+  G    G + E +  LGQ     +PV+   MLA  +
Sbjct: 139 LFVIQGVAMTYSYGGSITQNMLLPNGDMAEGLIPEVFSSLGQ-----VPVIVLIMLAVTV 193

Query: 188 VAWFVMERTIFGRYIYAVGGNQKAAELSGIRVRKYRAAALVVCSLFAVMAGTLLAARLGS 247
           V    +  T  GR +YA+GGN +AA LSGIR  +YR AA V+ +L A + G LLA+R+GS
Sbjct: 194 VVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYRVAAYVISALLASLGGILLASRIGS 253

Query: 248 GQPNAGERYLLDGLATVFIGMTMFRPGTATVPGTFFGALFIGVINNGLNLMGMDTYIQAI 307
            Q NAG  YL+D +A  +IG ++   G     GT  GA+ +GV+ NGL ++ +  Y   I
Sbjct: 254 SQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNGLVMLSVPYYAMDI 313

Query: 308 VKGVIILAAVAV 319
           +KG+++  A+A+
Sbjct: 314 IKGLVLALALAI 325