Pairwise Alignments

Query, 329 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

Subject, 332 a.a., putative ABC transporter permease protein YphD from Escherichia coli ECRC100

 Score =  185 bits (469), Expect = 2e-51
 Identities = 108/296 (36%), Positives = 160/296 (54%), Gaps = 1/296 (0%)

Query: 22  HVQRYSTLVVLVAMFLVFSLGVDRFLTGQNLLNIAQQISMLTIVGAGLTFGFAAREMDLS 81
           H+     LVV+  ++LVFSL    F++  N +N+ +  + + I    +T    + E+D+S
Sbjct: 23  HINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVS 82

Query: 82  VGYTVGLAGVLVPLLLVKGVPLPLALLAGLGAGLAVGAVNALLVTLVGIPSLIATLAVGS 141
           VG  V    V +  LL   VPL +A L  L  G  +G +  +L  +  +PS +ATL + S
Sbjct: 83  VGPMVAFVSVCLAFLLQFEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWS 142

Query: 142 ILYGINFLMTGGRAIYGGLDEAYLWLGQGRVAGIPVLAFFMLAAVLVAWFVMERTIFGRY 201
            L G+   MT    +    +E   WLG G+  G+PV A  M+    +  F+  +T FGR 
Sbjct: 143 ALRGMGLFMTNALPVPIDENEVLDWLG-GQFLGVPVSALIMMVLFALFVFISRKTAFGRS 201

Query: 202 IYAVGGNQKAAELSGIRVRKYRAAALVVCSLFAVMAGTLLAARLGSGQPNAGERYLLDGL 261
           ++AVGGN  AA+L GI VR+ R     +  L A + G LLAARLGSG   A      D +
Sbjct: 202 VFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVI 261

Query: 262 ATVFIGMTMFRPGTATVPGTFFGALFIGVINNGLNLMGMDTYIQAIVKGVIILAAV 317
           A V +G T    G  ++ GT  G L I +I NGL L+G++++ Q +V+GVII+ AV
Sbjct: 262 AAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAV 317