Pairwise Alignments

Query, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2

Subject, 1059 a.a., multidrug efflux RND transporter permease subunit OqxB27 from Pseudomonas sp. RS175

 Score = 1332 bits (3448), Expect = 0.0
 Identities = 680/1038 (65%), Positives = 828/1038 (79%), Gaps = 1/1038 (0%)

Query: 1    MNISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIA 60
            M  S+FFI RPIFA VLS+ + +AGAI++F+LPISEYPEVVPP+VVVRA FPGANPKVI 
Sbjct: 1    MKFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG 60

Query: 61   ETVASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRL 120
            ETVA+PLE+ I GVE MLYM SQ+ +DG + LT+TF LGTD D AQ  VQNRV +  P+L
Sbjct: 61   ETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGTDLDNAQVQVQNRVTRTEPKL 120

Query: 121  PSDVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVW 180
            P +V R+G+   K+SP LTMVVHL SP+ RYDM YL NYA+LN+KD L R+ GVG+VQ++
Sbjct: 121  PEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYALLNIKDELARLGGVGDVQLF 180

Query: 181  GAGDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINAR 240
            G GDY++RVWLDP K A R LTATDVV +IREQN QVAAG +GA P+      QLS+N +
Sbjct: 181  GMGDYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGALGAPPAPNATAFQLSVNTQ 240

Query: 241  GRLKTADEFGDIVLKTGGEGGVTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300
            GRL T +EF +I++++G  G +TRLRD+ARVEL ++QY LRSLLDN+PAVA+ I Q P +
Sbjct: 241  GRLVTEEEFENIIIRSGENGEITRLRDIARVELGSSQYALRSLLDNQPAVAIPIFQRPGS 300

Query: 301  NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360
            NA+ IS++VR  M ELK   P G+DYSIVYDPT FVR SIEAVVHTL EA+ LVVLVVI+
Sbjct: 301  NAIQISNDVRAKMDELKKGFPAGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVIL 360

Query: 361  FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPL+AVP+S++GTF+++  FGFS+NALSLFG+VLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480
            RNI  GL+  +AT RAM EV+GPIIA AL L AVFVP A ++GLTG+FYKQFA+TIAIST
Sbjct: 421  RNIGLGLTPVEATKRAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST 480

Query: 481  VISAFNSLTLSPALAAVLLRGHDEPQDWLTRAMNRVFGGF-FRLFNRVFHRASEGYGRGV 539
            VISAFNSLTLSPALAAVLL+ HD P+D  +R ++R+ G + FR FNR F RAS  Y   V
Sbjct: 481  VISAFNSLTLSPALAAVLLKSHDAPKDRFSRFLDRILGSWLFRPFNRFFDRASHSYVGAV 540

Query: 540  GGVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEAVI 599
            G V+R  G+ L VYA L+  T     S P+GFVP QDK+YL++FAQLP+ ASLDRTE VI
Sbjct: 541  GRVIRSSGIALFVYAGLMVLTFFGFSSTPTGFVPGQDKQYLVAFAQLPDAASLDRTEDVI 600

Query: 600  REMTDIALKRPGVQSAVAFPGLSVNGFTNSSSAGIVFVTLKPFAERKDPSLSAGAIAMDL 659
            + M+D+ALK+PGV+SAVAFPGLS+NGFTNS +AGIVFVTLKPF ERKDPS SAGAIA  L
Sbjct: 601  KRMSDLALKQPGVESAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSQSAGAIAGAL 660

Query: 660  QQRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDRGNLGYEALSDAVNAFVKRAAQTPE 719
              +Y+ ++EA++AIFPPPPV GLG +GGF++Q+EDRGNLGY+ L       + ++   PE
Sbjct: 661  NGQYSEIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKETMNIITKSRSVPE 720

Query: 720  LGPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGRVYQVR 779
            L   F++Y +NVPQ+D  +DR KAK  GV V+D+FDT+QIYLGSLY NDFN FGR YQV 
Sbjct: 721  LAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVN 780

Query: 780  VQADAPFRDTADDIGVLKTRNAAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAADVNGGPA 839
            VQA+  FR  +D IG LK RN  G M+PL++ + V    GP+ V+ YNGF  A++NG  A
Sbjct: 781  VQAEQQFRLESDQIGQLKVRNNRGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAA 840

Query: 840  PGFSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVFLVLAAQ 899
            PG+SSGQAE A E++  E LP G+  EWTDLTYQ+IL GN  L+VFP+ VLL FLVLAAQ
Sbjct: 841  PGYSSGQAEKAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ 900

Query: 900  YESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVEFARE 959
            YES +LPLA++LIVPM++LSA+ GV L+GGDNNIFTQIG +VLVGL+ KNAILIVEFA++
Sbjct: 901  YESWSLPLAVILIVPMTLLSAITGVILSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD 960

Query: 960  LEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVFAGMI 1019
             + EG   + A +EA RLRLRPILMTS AFIMGVVPLV SSGAGAEMRHAMGVAVF+GM+
Sbjct: 961  KQLEGMNPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFSSGAGAEMRHAMGVAVFSGML 1020

Query: 1020 GVTLFGLVLTPVFYVLLR 1037
            GVT FGL+LTPVFYVL+R
Sbjct: 1021 GVTFFGLLLTPVFYVLIR 1038



 Score = 41.6 bits (96), Expect = 3e-07
 Identities = 33/151 (21%), Positives = 63/151 (41%)

Query: 888  SVLLVFLVLAAQYESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSA 947
            +++LV LV+    ++    +  L+ VP+S++     + L G   N  +  G ++ +G+  
Sbjct: 350  ALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVV 409

Query: 948  KNAILIVEFARELEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMR 1007
             +AI++VE        G   V+A   A      PI+ T++      VP    SG   +  
Sbjct: 410  DDAIVVVENVERNIGLGLTPVEATKRAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFY 469

Query: 1008 HAMGVAVFAGMIGVTLFGLVLTPVFYVLLRK 1038
                + +    +      L L+P    +L K
Sbjct: 470  KQFALTIAISTVISAFNSLTLSPALAAVLLK 500