Pairwise Alignments

Query, 387 a.a., Efflux pump periplasmic linker BepF from Azospirillum sp. SherDot2

Subject, 391 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score =  432 bits (1111), Expect = e-126
 Identities = 233/388 (60%), Positives = 289/388 (74%), Gaps = 7/388 (1%)

Query: 4   KTLSLLIAAGVSVAALTGAATLR-----SPAEAQTASPAPPPAEVDVATVLARPVTDWQS 58
           K LS+ ++A   + A  GA  +R     + A+A+ A    P  EVDVATVL+R VTDWQS
Sbjct: 6   KRLSVAVSAVAVLGAAAGAGLVRGVGPGAVADARAADAPAPAVEVDVATVLSRTVTDWQS 65

Query: 59  YSGRLEAVDRVDIRPQVPGSIVAVHFRNGALVKQGDVLFTIDPRPYEAEVARAEAQVAAA 118
           YSGRLEAVD VD+RP V G+IVA+HF +GALVK+G+ LF+IDPRPY+AEV RA AQVAAA
Sbjct: 66  YSGRLEAVDHVDVRPLVSGTIVAIHFTDGALVKKGEPLFSIDPRPYQAEVDRAAAQVAAA 125

Query: 119 QARVRFTVADLDRAQKLVRDDTISRSTMDQRDNAAREATANLKAAQAALDIARLNLGYTR 178
           +AR  +T  D  RA++L+ D+ I++   D++ NAAREA+A +KAA AA + A+++LGYT 
Sbjct: 126 KARALYTSTDAARAERLLVDNAIAKRDYDEKQNAAREASAAVKAADAAFEAAQVSLGYTT 185

Query: 179 VTAPVSGRVSRAERTVGNVVAAGATAEPLTTLVSESPIYASFDVDEQTYLRHIAPMRDSG 238
           +TAPVSGRVSRAE TVGNVV+AGA A  LTTLVS SPIYASFDVDEQTYLR++   R + 
Sbjct: 186 ITAPVSGRVSRAELTVGNVVSAGANAPLLTTLVSVSPIYASFDVDEQTYLRYLGRDRQA- 244

Query: 239 TIPVRLGLANEEDYSRSGMVEHVDNRLDSVSGTIRVRARFDNGDGTLVPGLYARVKVGGT 298
            +PV LGLANE+ YSR G +  VDNRLD+ S TIRVRA  DN DG LVPGLYARVKVGG 
Sbjct: 245 KVPVALGLANEDGYSRKGTISSVDNRLDTQSATIRVRATIDNRDGALVPGLYARVKVGGG 304

Query: 299 KPYDALLVDDRAIGTDQDKKFVLVVTAENKVEYRPVKLGTLQNGLRVVTAGLSAGEQVVV 358
             + A+L+DD AIGTDQ KK+VLVV   NKV+YR V+LG L + LRV+ AGL  GE++VV
Sbjct: 305 DAHPAVLIDDAAIGTDQSKKYVLVVNDVNKVQYREVQLGALHDNLRVIDAGLKPGERIVV 364

Query: 359 NGMQHARPGMAVTPKTVAMGTEKTQTAA 386
           NG+  ARP   V P  V M T+  ++AA
Sbjct: 365 NGLMRARPNDTVKPHPVDM-TDAARSAA 391