Pairwise Alignments

Query, 387 a.a., Efflux pump periplasmic linker BepF from Azospirillum sp. SherDot2

Subject, 411 a.a., MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

 Score =  181 bits (459), Expect = 3e-50
 Identities = 118/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 41  AEVDVATVLARPVTDWQSYSGRLEAVDRVDIRPQVPGSIVAVHFRNGALVKQGDVLFTID 100
           A V  A   +  V  + S  G + A + V +R +V G ++A+HF+ G  VK G++L  ID
Sbjct: 64  APVQAAMTQSASVPYYLSGLGTVTAANTVTLRSRVNGQLMALHFQEGQQVKAGELLAEID 123

Query: 101 PRPYEAEVARAEAQVAAAQARVRFTVADLDRAQKLVRDDTISRSTMDQRDNAAREATANL 160
           PRP++ E+ +A+ Q+A  QA +     DL R Q+LV+ + ISR  +D +  A R+A   L
Sbjct: 124 PRPFQVELTQAQGQLAKDQASLANARQDLARYQQLVKTNLISRQELDAQTAAVRQAEGTL 183

Query: 161 KAAQAALDIARLNLGYTRVTAPVSGRVSRAERTVGNVVAAGATAEPLTTLVSESPIYASF 220
           KA + A+  A+L L Y+++TAP+SGR+   +  VGN + +G T   +  +    PI   F
Sbjct: 184 KADEGAVASAQLQLDYSKITAPISGRIGLKQVDVGNYITSGDT-NGIVVITQTYPIDVVF 242

Query: 221 DVDEQTYLRHIAPMRDSGTIPV--RLGLANEEDYSRSGMVEHVDNRLDSVSGTIRVRARF 278
            V E   +  I   + SG  PV      AN++  S+ G++  +DN++D+ +GTI+++ARF
Sbjct: 243 TVPE-AEISTILSAQKSGQPPVVEAWDRANQKKLSQ-GILLSMDNQIDATTGTIKLKARF 300

Query: 279 DNGDGTLVPGLYARVKVGGTKPYDALLVDDRAIGTDQDKKFVLVVTAENKVEYRPVKLGT 338
           DN D  L P  +  +++      +A++    A+    + +FV ++  +N+V  R V    
Sbjct: 301 DNLDDALFPNQFVNIRMKVDTLKNAVVAPSAAVQMGNEGRFVWILNDKNEVSKRQVTTSI 360

Query: 339 LQNGLRVVTAGLSAGEQVVVNGMQHARPG-------MAVTPKTVAMGTEKT 382
               L VVTAGL A  QVV +G+     G        A+T KT A+  EK+
Sbjct: 361 QYGQLVVVTAGLDANVQVVTDGIDRLTEGAKVEVIPSALTEKTPAIAGEKS 411