Pairwise Alignments

Query, 325 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

Subject, 333 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  160 bits (404), Expect = 5e-44
 Identities = 106/325 (32%), Positives = 165/325 (50%), Gaps = 19/325 (5%)

Query: 4   LRRSETVIAGILLLAMVLIGTINPAFWQLDNLFSLMRSNVIIGIMAMGVLLVLISGGIDV 63
           LR     +   L++  V++   +P F     L +++    ++GI A+G   V+I+ GID+
Sbjct: 22  LRSGVGPLLAALIVICVVLSIASPEFLTTSTLTNILVQTSVVGIAAVGGTFVIITSGIDL 81

Query: 64  SFPAFA-----VAAMYLTIKGMLALGYNGVVLPLLAATLMGLAFGAVNGFFVYKFRMIPL 118
           S  +       VAA  +      A+G    +  L  A  +G   GA+NGF V   R++P 
Sbjct: 82  SVGSLVALSGMVAATLMAGSTPDAVGVG--IAGLAIALAVGAGVGALNGFSVIWLRLVPF 139

Query: 119 IVTLGTSAMVRGFLLGVVGTSMININKMPTALIDFARTDVVSVTKADGTTYGLTAMVLIY 178
           IVTL   AM RG  L +                DF     +   K   T  GL A +++ 
Sbjct: 140 IVTLAMMAMGRGLTLAISDGR---------TKFDFPNAFTLFGAK---TFAGLPAPMIVM 187

Query: 179 LGLALAMHLVLRYTMIGRSAYALGGDPEAARRAGFDLRKTIFFIYCVAGALAGFAGLLHS 238
           L + +  H++LR T  G   +A+GG+ EAAR AG  +R+ IF  Y +AG  +  AG++ +
Sbjct: 188 LIVFVIGHILLRKTTFGHQVFAVGGNQEAARLAGIPVRRVIFLTYTLAGVTSAIAGIVLA 247

Query: 239 GMIWLANPRDFVGLELDVIAAVVLGGASIFGGRGSVLGTMLGVFMLVMVKNSLIIMRVDT 298
           G +  A P    GLEL VIA VV+GG S+ GGRGS++GT +GV ++ ++   L ++ V+ 
Sbjct: 248 GRLNSALPSAANGLELQVIAGVVIGGTSLAGGRGSIVGTFIGVVLIGVINVGLSLLGVNP 307

Query: 299 TWQLVVVGLIVIAATALSAWRDRRR 323
            W   + G ++ AA  L A   RR+
Sbjct: 308 FWTQFIQGGVIFAAVMLDALSQRRK 332