Pairwise Alignments

Query, 325 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

Subject, 326 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  194 bits (492), Expect = 3e-54
 Identities = 118/316 (37%), Positives = 169/316 (53%), Gaps = 21/316 (6%)

Query: 3   LLRRSETVIAGILLLAMVLIGTINPAFWQLDNLFSLMRSNVIIGIMAMGVLLVLISGGID 62
           L R  E   A ++++  V++G INP F+QL  LF L+ S   + + A+G L         
Sbjct: 26  LSRNPEWFTAALIVVMCVIVGAINPRFFQLATLFDLLHSATTMSLFALGAL--------- 76

Query: 63  VSFPAFAVAAMYLTIKGMLALGYNG-VVLPLLAATLMGLAFGAVNGFFVYKFRMIPLIVT 121
                     MY   K + A   +    L L+   L G+  G +NG  V++ +   LIVT
Sbjct: 77  ---------TMYAITKAVFAWWPDAPFALILVVGALGGIVLGVINGLLVHRLKAPSLIVT 127

Query: 122 LGTSAMVRGFLLGVVGTSMININKMPTALIDFARTDVVSVTKADGTTYGLTAMVLIYLGL 181
           +GT  + RG LL  VGT+      +P ++  F R  +     ADG    L A VL  +  
Sbjct: 128 IGTQYLYRGVLLTFVGTTFFM--NIPHSMDHFGRIPLFFYHTADGLRAVLPASVLALVLA 185

Query: 182 ALAMHLVLRYTMIGRSAYALGGDPEAARRAGFDLRKTIFFIYCVAGALAGFAGLLHSGMI 241
           A+    +L  TM+GR  YA+GG    A R G++LR    F++   G LAG AG+LH    
Sbjct: 186 AVVTWWLLNRTMMGRGVYAMGGSLAIAERLGYNLRAIHLFVFGYTGMLAGIAGILHVSNN 245

Query: 242 WLANPRDFVGLELDVIAAVVLGGASIFGGRGSVLGTMLGVFMLVMVKNSLIIMRVDTTWQ 301
            LANP D VG ELDVIAAV+LGGA I GG G+V GT+LGV ++ ++ + LI++ V +TWQ
Sbjct: 246 RLANPFDLVGTELDVIAAVILGGARITGGTGTVAGTLLGVVLVTLINSVLILVGVPSTWQ 305

Query: 302 LVVVGLIVIAATALSA 317
            V++G  ++ A  L A
Sbjct: 306 KVIIGAFILVAGTLFA 321