Pairwise Alignments

Query, 319 a.a., Cytochrome c oxidase subunit 2 from Azospirillum sp. SherDot2

Subject, 366 a.a., cytochrome c oxidase, subunit II from Pseudomonas sp. S08-1

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 80/341 (23%), Positives = 129/341 (37%), Gaps = 58/341 (17%)

Query: 3   SLQLLPPSASAHAADMDWLFAALLGVSAFILLLVFGLMILFCVRYRKGSKVERGNRLGRT 62
           ++ +LP       +  D L   +  +   I ++VFG+M    + +R+ S  ++      +
Sbjct: 17  AVNMLPGVTEVSRSVFD-LHMIIFWICVVIGVVVFGVMFWSMLIHRR-STGQQPAHFHES 74

Query: 63  WRVEVAWTGLTFAAFLVLYFWGANLYVRIHSPPSDATDIYVVGKQWMWKIEHPGGQREI- 121
             VE+ WT + F   + +        + I+       DI V G QW W  ++ G   E  
Sbjct: 75  TTVEILWTVVPFVILVAMAVPATKTLIDIYDTSESELDIQVTGYQWKWHYKYLGQDLEFF 134

Query: 122 -------------------------DTLHVPVGRPVRLVLTSQDVIHDFAIPAFRIRQDA 156
                                      L VPVG  VR ++T+ DVIH + +PA  +++DA
Sbjct: 135 SNLATPSDQIYNKAEKDEHYLLEVDQPLVVPVGTKVRFLITAADVIHSWWVPALAVKKDA 194

Query: 157 VPGRYETLWFTPTEVGEYRLFCAEFCGTWHARMGGTVVVMEPSDFQHWLDSQDPGPSLAQ 216
           +PG     W    E G YR  C E CG  H  M   V      DF  WL  +    +  +
Sbjct: 195 IPGFVNESWTRIEEPGIYRGQCTELCGKDHGFMPVVVEAKSKEDFAKWLAERKEEAAKIK 254

Query: 217 E--------------GEALFRSYGCSGCHGGAGTVHAPKLEGLFGRPVPLEGGRTVIADD 262
           E              GE  +++  C+ CH   G    P    L G  +        +AD 
Sbjct: 255 ELTSKEWTREELMARGEKAYQT-NCASCHQPNGEGLPPMFPALKGSKI----ATGAVADH 309

Query: 263 RYLRDSILMPKAEIAAGYP-PVMPSFAGQIGEDDLLKLVAY 302
            ++          +  G P   M +F  Q+ E D+  ++ Y
Sbjct: 310 IHI----------VVQGKPGTAMAAFGKQLSEVDIAAIITY 340