Pairwise Alignments

Query, 555 a.a., Oligopeptide-binding protein AppA from Azospirillum sp. SherDot2

Subject, 532 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  164 bits (414), Expect = 1e-44
 Identities = 136/504 (26%), Positives = 231/504 (45%), Gaps = 42/504 (8%)

Query: 67  QPEPPTLMLGLNQQGPTQTVAGKI-YQGLLTYDRKLN-PLPSLAESWTVSPDGLTYTFKL 124
           +  P +    +   GP+   + ++ Y  L+ +D   N P+ SLAESWT+SPDG TYTF L
Sbjct: 34  EASPESFNPQIASSGPSFVASSQVLYNRLINFDPVKNTPVSSLAESWTISPDGKTYTFAL 93

Query: 125 YQNVKWHDGK------PFSANDVVFSTSKFLMEVHPRARAAFSRCE------------SI 166
            + VK++  K       F+A+DV+FS  +     HP    +    E             +
Sbjct: 94  RKGVKFNSNKYFKPTRDFNADDVIFSVLRQKDPKHPYHNVSQGNYEYFNDVGLDKLIQDV 153

Query: 167 KALDDNTVEFKLKEPFPAFIQAFEVSSAPIVPAHIYEGSDYRTNPAN--NTPIGTGPFKL 224
           K +DD  V+F L EP  AF+  + +  A I+ A   +    +  P N    PIGTGP+ L
Sbjct: 154 KKVDDYHVQFTLSEPNAAFLADWGMDFASILSAEYADAMLKKGTPENVDTWPIGTGPYVL 213

Query: 225 KEWVKGSYIQLVRNEDYYKKDLPYLDGITFRVIPDAASRSLALESGQVQQTQYSDLEPFE 284
           +++   S I+ V N +Y++ ++P    + F + P+  +R   L++ + Q        P +
Sbjct: 214 QQYKVDSLIRYVANPNYWEGEVP-TKHLIFSITPNVETRLAKLQTNECQIIPAP--SPVQ 270

Query: 285 VPRMKTLPNVTLTTAGYEFVAPMAWLEINHRVKPLDDKRFRKAIAYAIDRKFIRDKIWFG 344
              +K   ++TL +        + +L  N   KP D+   R+A+ YA D+K I + ++ G
Sbjct: 271 FDAIKNNKDLTLHSVD---ALNVGYLAFNTEKKPFDNVLVRQALNYATDKKAIVNAVFMG 327

Query: 345 LGRVPTGPINSVVKFYDPKVTTYEPNLDKAKALLDEMGLKPDGKGVRATVKLMPM--PYG 402
            G V   PI   +  ++  +  Y  + +KAKALL + GL+   KG   T+  MP+  PY 
Sbjct: 328 SGTVAKSPIPPNMLGFNKDLKDYSYDPEKAKALLKQAGLE---KGAEVTLWSMPVQRPYN 384

Query: 403 ETWTRLGEYLKQALGKVGVSVVLESTDAAGWAQRVANWDYEITT-NFLYQYGDPALGVAR 461
               R+ E ++    KVGV   + S +   +   +   +++     ++   GDP      
Sbjct: 385 PNSRRIAEMIQSDWAKVGVKAKIVSYEWGEYLSGMRKGEHDSALFGWMSDNGDPDNFADV 444

Query: 462 TYISSNIRKGVLFTNTMGYSNPKVDELFDQASRENDPAKRQEQYSEVQRILSDDLPVVWL 521
               ++I+ G   +N   + +   D L  +A   + PA+R + Y + Q I     P  W+
Sbjct: 445 LLGCNSIKTG---SNAARWCDKGYDALVQKAKLTSSPAERAKLYGQAQEIFYQQAP--WI 499

Query: 522 LEMEFPTFLDKRVKNANTTAIGVN 545
                 TF   R   +N T   V+
Sbjct: 500 ALANGKTFYATR---SNVTGYSVS 520