Pairwise Alignments

Query, 555 a.a., Oligopeptide-binding protein AppA from Azospirillum sp. SherDot2

Subject, 543 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  322 bits (825), Expect = 2e-92
 Identities = 194/518 (37%), Positives = 283/518 (54%), Gaps = 18/518 (3%)

Query: 28  LLAAALAIPGTAALIAAPAMAQGTAQETPVRGGVLNSIVQPEPPTLMLGLNQQGPTQTVA 87
           LL+AALA  G   L + PA+A     ETP +GG++      EP TL+   +    T+ ++
Sbjct: 24  LLSAALA--GAMLLPSMPALAT----ETPKKGGIVTLAGLGEPTTLVPLSDSNTRTRAIS 77

Query: 88  GKIYQGLLTYDRKLNPLPSLAESWTVSPDGLTYTFKLYQNVKWHDGKPFSANDVVFSTSK 147
            KI +GL+ +D +  P P LAESW  S DGL YTFKL + VKWHDGK F+A DV FS   
Sbjct: 78  TKILEGLVRFDSEFKPHPVLAESWETSADGLRYTFKLRKGVKWHDGKDFTAQDVKFSLLA 137

Query: 148 FLMEVHPRARAAFSRCESIKALDDNTVEFKLKEPFPAFIQAFEVSSAPIVPAHIYEGSDY 207
           F  +V PR R  F+    I+  +  T    L +P P  ++A      PI+PAH Y   +Y
Sbjct: 138 F-KKVGPRGRITFANLADIETPNPLTAVVVLSKPAPYLLRALTGGETPILPAHAYASENY 196

Query: 208 RTNPANNTPIGTGPFKLKEWVKGSYIQLVRNEDYYKKDLPYLDGITFRVIPDAASRSLAL 267
             +P  N P+GTGPF  +EW +GSY++L +N DY++ DLPYLDG   R + DAAS ++++
Sbjct: 197 NESPNGNAPVGTGPFVFEEWKRGSYVKLKKNPDYWQADLPYLDGFVARFVADAASTTISV 256

Query: 268 ESGQVQQT---QYSDLEPFEVPRMKTLPNVTLTTAGYEFVAPMAWLEINHRVKPLDDKRF 324
           E+G+   T    YSDLE     R++  P + +      ++   A  E N     L  K  
Sbjct: 257 ETGEADYTADVSYSDLE-----RLRQNPKLAVEVYTDAYLNNAAIFEFNLENAILAKKEV 311

Query: 325 RKAIAYAIDRKFIRDKIWFGLGRVPTGPINSVVKFY-DPKVTTYEPNLDKAKALLDEMGL 383
           R A+A+AIDR FI D I+FG  +     I +V   Y D K  TY  +L KA  LLD+ G 
Sbjct: 312 RHALAHAIDRNFINDAIFFGTAKPAGSNIPAVFSTYNDEKPFTYPFDLAKANELLDKAGY 371

Query: 384 KPDGKGVRATVKLMPMPYGETWTRLGEYLKQALGKVGVSVVLESTDAAGWAQRV-ANWDY 442
                G R +++L  +P  + + +  EYL+ + GK+GV V +   D A + +RV     +
Sbjct: 372 PKGADGTRFSLRLAFLP-SDVFRKTSEYLRSSFGKLGVKVDIVEGDLATFIKRVYTERGF 430

Query: 443 EITTNFLYQYGDPALGVARTYISSNIRKGVLFTNTMGYSNPKVDELFDQASRENDPAKRQ 502
           ++T N + +  DP  GV R Y S  I+    + N   Y+NP VD+LF  A+ E D  KR 
Sbjct: 431 DLTVNGISRLFDPTAGVQRLYWSDGIKNPAPYVNAAHYNNPTVDDLFRAAAIEVDETKRA 490

Query: 503 EQYSEVQRILSDDLPVVWLLEMEFPTFLDKRVKNANTT 540
            Q+ E+Q+++ DDLP   ++ +      +  +K+  TT
Sbjct: 491 GQFHEIQKVVGDDLPNFSIVALPTVILRNTSLKSLVTT 528