Pairwise Alignments
Query, 1072 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Subject, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Score = 504 bits (1298), Expect = e-146
Identities = 277/528 (52%), Positives = 349/528 (66%), Gaps = 9/528 (1%)
Query: 538 RVLGACYDITDRRCAEDALRALNATLEQRVAERTADRDRMWRLSTDIMLVARFDGTIGAV 597
RV GA RR + LR N LE+RV ERT +RDR WRLS D LVA +G +
Sbjct: 747 RVEGALRLAELRRETAEQLRQANEALERRVEERTRERDRFWRLSRDPFLVADREGRWLSA 806
Query: 598 NPAWTTLLGWREEDLQGAVFLDFVHPDDLDATVAEVGRLRTGLTTLRFENRYRHKDGSYR 657
+PAWT +LGW E ++ G HPDD D T EV +L G +T RFENR+R + G YR
Sbjct: 807 SPAWTEILGWTEAEMLGRTSEWMEHPDDCDKTRREVRKLAGGGSTFRFENRFRTRGGHYR 866
Query: 658 WISWTAVPDDRFIHAVGRDVTARKEAAAALRRAEDQLRQAQKMEAVGQLTGGVAHDFNNL 717
+WTA P D + V RDVT KE AA LR+ E+QLRQ+QKMEAVGQLTGG+AHDFNNL
Sbjct: 867 DFAWTATPADELMFCVARDVTEEKERAATLRKTEEQLRQSQKMEAVGQLTGGMAHDFNNL 926
Query: 718 LQALSSCLTMIGRRSAE-PRLAPLLEAGMQAVDRGAKLVQQLMGFARRDSLRPEPIDVRD 776
LQA+SSCL ++ RR P + P+L+AG QAVDRGA L++QLM F+RR SL+PE DVRD
Sbjct: 927 LQAMSSCLQLVSRRVGHAPEVEPILDAGRQAVDRGASLIRQLMAFSRRQSLQPEAFDVRD 986
Query: 777 RVLGMAGLLERALRADIRLETRFAPGLHPIEVDPTQFELALINMAVNARDAMLGGGTLTV 836
R+LG+ L+RALRADI LE GL P+ DP QF+LA++N+A NARDA+ G + V
Sbjct: 987 RLLGLRLFLDRALRADIGLEFALQGGLWPVMADPVQFDLAVLNLATNARDAIDADGAVVV 1046
Query: 837 EAENRTLGPGETTGLDGGGLEGEFLRLTVADTGTGMPPEVVARAFDPFFTTKEVGKGSGL 896
A+N L G+D GL GEFL++ V D+G G+ P+ + R F+PFFTTK VGKG+GL
Sbjct: 1047 GADNVVL-----DGMD--GLSGEFLKVFVRDSGRGIAPDALGRVFEPFFTTKAVGKGTGL 1099
Query: 897 GLAQVYGLARQAGGTVWIESRPGEGTRIVLLLRAGTGIPRASAAPAQAAAGLVRGARVLM 956
GLAQVYG RQ+GGT +ES G+GT + LLL + A VL+
Sbjct: 1100 GLAQVYGFCRQSGGTATVESVEGKGTVVSLLLPRAEATVASETPNAPPVLPSAADIHVLL 1159
Query: 957 VEDDPVVASSVAAALEESGWTVLRAASADEALPLLAGDERIDLLFSDVVMPGRLSGIDLG 1016
VEDDPVVA V AALE+ G+ V RAA+ +EAL L + +DLLFSDVVMPG ++G+ L
Sbjct: 1160 VEDDPVVAPVVTAALEDLGYRVTRAATGEEALRRLE-EAAVDLLFSDVVMPGSINGVALA 1218
Query: 1017 REAALLRPGLPVVLTTGYSEDVARTEGIAVLSKPYRIDTLLQTLSEAL 1064
+EA P L ++LTTGYSED+A T+ + VLSKPYRI+ L + E L
Sbjct: 1219 QEARQRWPDLGILLTTGYSEDLAATKSVRVLSKPYRIEDLAHAIQEEL 1266
Score = 98.6 bits (244), Expect = 3e-24
Identities = 101/333 (30%), Positives = 141/333 (42%), Gaps = 53/333 (15%)
Query: 2 VGLMMRSRQAMFIGWGPDVTVLYNDAYRDILGSRHPAALGRPMSEVWPDAWPQVR---DF 58
+G+ + SR + + WGP ++YNDA+ + G++HP ALGRP EVW + W + D
Sbjct: 44 IGICLGSRFPIVLYWGPTRALIYNDAWSPVPGNKHPWALGRPGREVWAEIWDIIGPMFDH 103
Query: 59 VRRAYEGESLLHEDLLVPLERRGLGEDYYFTFSYTPIAGETGCIGGFLCIVAETT---LA 115
V A GE+ ED L+PL R G E+ YF +SY+P+ GE G + G V ETT LA
Sbjct: 104 VMTA--GEATWSEDQLLPLNRFGYVEECYFYYSYSPVRGEDGRVEGIFTAVTETTQRVLA 161
Query: 116 VRGRRRMAFHAELEHRLRELTNPL-----CVVTVAAE---ALGRHLDASRVGYGVMDESE 167
R R + +E R R C+VT+ E AL DAS G +
Sbjct: 162 ERRERLLRGVSEATSRARSAAEACKAAVGCLVTLPEESPFALAYLRDASS---GALQR-- 216
Query: 168 RFFTTERNWTDGTVAPHIGTHDLLVFGEPVLATLRRGQSLVVDDAATD-----PRTATPD 222
+E G +AP D P L G + V+ P T P+
Sbjct: 217 --VASEGLPPGGDLAPERTLPDCNPTPWPFAEALATGAPVTVEGLTLRCPGRLPGTPWPE 274
Query: 223 ---------LLAAFAAFGFSSVVTASLVKQGRMVAALYVHDRRSRHWREDEIELIEEVAE 273
+L+A A +VT + R + A YV L E A
Sbjct: 275 AVEQALVVPILSARADAPHGFLVTG--ISPRRRIDAPYV-------------TLFERAAG 319
Query: 274 RTWSAVERVQAEEEVRRANERLRAEGERLRALF 306
+A+ +A EE RR E L AE +R + F
Sbjct: 320 HIATAITNAEAYEEERRRAEML-AELDRAKTAF 351
Score = 79.3 bits (194), Expect = 2e-18
Identities = 116/452 (25%), Positives = 173/452 (38%), Gaps = 92/452 (20%)
Query: 684 AAALRRAEDQLRQAQKMEAVGQLTGGVAHDFNNLLQALSSCLT--------MIGRRSAEP 735
A A+ AE + ++ E + +L F+N + LT M+ R AE
Sbjct: 322 ATAITNAEAYEEERRRAEMLAELDRAKTAFFSNASHEFRTPLTLMLGPVEDMLQRSPAED 381
Query: 736 RLA-PLLEAGMQAVDRGA----KLVQQLMGFAR----RDSLRPEPIDVRDRVLGMAGLLE 786
R A P+ ++ V R +LV L+ +R R R EP+D+ +A
Sbjct: 382 RAAVPVERDALELVHRNGQRLLRLVNALLDVSRIEAGRMKARFEPVDLAAFTAELASSFR 441
Query: 787 RAL-RADIRLETRFAPGLHPIEVDPTQFELALINMAVNARDAMLGGGTLTVEAENRTLGP 845
A+ RA + P P+ +D +E ++N+ NA L GG
Sbjct: 442 SAMDRAGLDYRIDCPPLPEPVWIDRDLWEKIVLNLISNAFKYTLSGGVAVAVQP------ 495
Query: 846 GETTGLDGGGLEGEFLRLTVADTGTGMPPEVVARAFDPFFTTK----EVGKGSGLGLAQV 901
GE LTV DTG G+P E R FD F + +G+G+GLA V
Sbjct: 496 -----------VGERAVLTVRDTGVGIPAEEQPRVFDRFHRIEGQSGRTHEGTGIGLALV 544
Query: 902 YGLARQAGGTVWIESRPGEGTRIVLLLRAGTGIPRASAAPA------------------- 942
L + GGTV ++S G G+ + L G A+ PA
Sbjct: 545 KDLTQLHGGTVALDSDVGRGSTFTVTLPFGNAHVPATERPAGPIPASTATRADAFVAEAL 604
Query: 943 ---------QAAAGLV------------RGARVLMVEDDPVVASSVAAALEESGWTVLRA 981
Q+A LV R A +L+ +D+ + S V L +G+ V
Sbjct: 605 HWLPQEQGEQSAPALVDGASSGPAPERMRNATILLADDNADMRSYVERLLTAAGYRVETV 664
Query: 982 ASADEALPLLAGDERIDLLFSDVVMPGRLSGIDLGREAALL----RPGLPVVLTTGYSED 1037
A+ A DL+ SDV+MP L G G AAL LP++L + + +
Sbjct: 665 GDGVAAVE-TAKAAPPDLVLSDVMMP-HLDG--FGVIAALRGHPHTRDLPIILLSARAGE 720
Query: 1038 VARTEGIAV-----LSKPYRIDTLLQTLSEAL 1064
+ EG+ L KP+ LL + AL
Sbjct: 721 ESSIEGLQAGADDYLVKPFSARELLARVEGAL 752
Score = 37.4 bits (85), Expect = 7e-06
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 327 NDAYFELIGRRD--VIGKPGREALPEI---VGQGFFELADRVYRTGEPFVGEGMPARIAR 381
NDA+ + G + +G+PGRE EI +G F D V GE E + R
Sbjct: 67 NDAWSPVPGNKHPWALGRPGREVWAEIWDIIGPMF----DHVMTAGEATWSEDQLLPLNR 122
Query: 382 RPGTPLEERFVTFVFQPIRDDEGQVTGLFVQGSDVTGMKRTEEALRESEQRL 433
+EE + + + P+R ++G+V G+F ++ T+ L E +RL
Sbjct: 123 FGY--VEECYFYYSYSPVRGEDGRVEGIFTAVTET-----TQRVLAERRERL 167