Pairwise Alignments

Query, 380 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Azospirillum sp. SherDot2

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  132 bits (331), Expect = 2e-35
 Identities = 107/373 (28%), Positives = 179/373 (47%), Gaps = 21/373 (5%)

Query: 2   FGRRTLLAAAAALALIIPVAGTTGAQAQQPPVRIALIGPMSGTGAFEGQLGLEGAQAMAA 61
           F ++  LA A A AL +       +   Q  V+I + GPM+G  A  G+  ++GAQA A 
Sbjct: 5   FYKKGFLALAVATALGV-------SSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAAD 57

Query: 62  VINAKGGVAGGRKIELLTYDDKGSPEDGVSAAKRAMEQDNVDMIIGGWFSAVALSMKEVT 121
            INA GGV  G KI L+  DD   P+  V+ A R ++QD V  ++G + S+  +   EV 
Sbjct: 58  KINAAGGV-NGEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVY 116

Query: 122 RDK-IITVMTSSQHPKVTEEGHKYLFRLNATSAMMSEFYSKAICDRIKPKSIAFMNVNDD 180
            +  +I +   S +P+VTE G   +FR+              I D +K K +A ++  D 
Sbjct: 117 DEAGVIAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDT 176

Query: 181 WGRLELDNYTKLLTGCGIEVKGHEFYNRTDTDFTTALTKLKSLNADAIYVAAINTSQGAT 240
           +G+   D     L   G++   +E   R + DF+  +TK++S  AD +Y   ++   G  
Sbjct: 177 YGQGLADATKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPL 236

Query: 241 IYRQIKQTGYRG-KVIASAGNMNPKLVELSGNSLEQVYSASPFTEDGAAPSLKP----WL 295
           + RQ+++ G +  K ++  G +  +LV  +G +    Y    +   GA P L P     +
Sbjct: 237 V-RQLREQGLKDVKFMSDDGIVTDELVSTAGGA---QYVDGVYMTFGADPRLLPDSKAVV 292

Query: 296 DQYRKDYKNDPSFIAALGAQAVQTLAFGVDAAGGDPRAYDKIAAALKSQAVPTVMGELRF 355
           +++RK    +P         ++Q LA   +  G      +  A  LK+  V TVMGE ++
Sbjct: 293 EEFRK-AGTEPEGYTLYAYASLQALAAAFN--GAKSNKGEDAAKWLKANPVQTVMGEKKW 349

Query: 356 SDKGQASQAIHLV 368
             KG  + + ++V
Sbjct: 350 DSKGDLTVSDYVV 362