Pairwise Alignments

Query, 294 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1265 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  149 bits (376), Expect = 3e-40
 Identities = 88/248 (35%), Positives = 137/248 (55%), Gaps = 15/248 (6%)

Query: 20   RILVVEDSPLNQMLVTAILAQAGHRADTAGNGLEAVMAAQAGGYDLILMDLSMPEMDGLT 79
            RIL+ ED+  NQ+  T +L + G+  + A +G +AV AA  GG DL+LMD+ MP MDGL 
Sbjct: 994  RILLAEDNRTNQLFATTLLRRLGYTVEVAEDGEQAVAAACRGGLDLVLMDVQMPGMDGLE 1053

Query: 80   ATRLLRDLPGPAGRVPVVAMTADTDEADRVRCQHAGMNDHVAKPVDRAQLLETVEKWLRA 139
            A + +R   G    +P++A+TAD     R  C  AGM+D++ KP+ RA LL  +++W+  
Sbjct: 1054 AAQAIRARGGALAGLPIIALTADAMPGTRELCLRAGMSDYLTKPISRAGLLSALDRWIGT 1113

Query: 140  SEWRASASPDMSSGFGLCASA----APAAAGEVLDREVLAQLAQDLDAELLTDVLRQFVE 195
            +E  A+A+ +   G G  ++A         GE LD  VL  L + + A+ L  ++  F+E
Sbjct: 1114 AEPPAAAA-EAGGGSGKGSAAVNDDGSGEDGEALDEAVLDDLVETVGADSLALIVDSFLE 1172

Query: 196  ETRERVARI--------AGETDRTVLTREAHTLKSTAGTFGASTLCSAARALEMACRASL 247
            +   R+ R+        AG  D   L +EAH L S AG+FG   +   A  +E+ CR   
Sbjct: 1173 DVSHRLERLSAMDDAMPAGTVDLRALAQEAHDLSSLAGSFGGMAVMHIAWRMEVLCRN-- 1230

Query: 248  AEREEAEK 255
             +R++A +
Sbjct: 1231 GDRDQAAR 1238



 Score = 39.3 bits (90), Expect = 5e-07
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 3   ERTPPSLLPTDGQPAPCRILVVEDSPLNQMLVTAILAQAG---HRADTAGNGLEAVMAAQ 59
           E  PP+  P  G+     +LVV+D  +N+ ++ ++L   G      ++  + LEA+    
Sbjct: 834 EALPPAEQPLAGRS----VLVVDDLAVNRRVLASMLDSLGAWPTCVESGPDALEALRRGA 889

Query: 60  AGG--YDLILMDLSMPEMDGLTATRLLRDLPGPAGRVPVVAMTADT----DEADRVRCQH 113
           AGG  +D++L D +MP M G T    +   P   G   V+ +T       +        H
Sbjct: 890 AGGRPFDVVLADQTMPGMGGDTLLATVAGDPALIGTRRVLIVTLGPAVRGESGPAPGLAH 949

Query: 114 AGMNDHVAKPVDRAQLLETVEKWLRASEWRASASP 148
           A +N    +P+ ++ L   +     A+   ASA P
Sbjct: 950 ATLN----RPLRQSSLAACLTGLFAAAAPAASAVP 980