Pairwise Alignments

Query, 1173 a.a., ATP-dependent helicase/nuclease subunit A from Azospirillum sp. SherDot2

Subject, 726 a.a., Superfamily I DNA and RNA helicases from Kangiella aquimarina DSM 16071

 Score = 80.9 bits (198), Expect = 3e-19
 Identities = 122/563 (21%), Positives = 214/563 (38%), Gaps = 147/563 (26%)

Query: 365 AYRERKAARALLDYDDLILAANRLLSGKDGTPRVPWVLYKLDGGLDHILIDEAQDTNPDQ 424
           AY E      L+D+++L+L A  L +        P +L        HIL+DE QDTN  Q
Sbjct: 176 AYEEACKRGGLVDFNELLLRAYELWANN------PHLLKHYQDRFQHILVDEFQDTNAIQ 229

Query: 425 WAIVASLAGEFFVELEAAAPDGKIRTVFAVGDEKQSIFSFQRADPAEFARMRRHFQDKAE 484
           +A +  L  +                +  VGD+ QSI+ ++ A      +  + F D  +
Sbjct: 230 YAWIRLLCND-------------NNRITIVGDDDQSIYGWRGARIENIQQFEKDFPD-CK 275

Query: 485 VAQRTWAGVDLDISFRSTSAVLETVDAVFALDHARDGVA-----SDASPTIRHRAFRRGQ 539
           V++       L+ ++RSTS +L+  +AV A +  R G +     +   P I + AF   +
Sbjct: 276 VSR-------LEQNYRSTSTILKAANAVIANNQDRMGKSLWTEGNQGEPIILYSAFNEQE 328

Query: 540 AGLVELWPPVKPAEAIETPAWAPPVARETADSPSARLASVIAATVHRWIDGGETLEAKGR 599
                                                A  IAA +  W+  G +      
Sbjct: 329 E------------------------------------ARFIAARIEDWVQQGNSY----- 347

Query: 600 PVQPGDVMVLVRRRTAFVTELVRALKDRGVPVAGVDRMVLTEQLAVMDLVALSDFLLLPD 659
                D + ++ R  A    L  A+  +G+P      +   E+  + D +A    +   D
Sbjct: 348 -----DDIAILYRSNAQSRILEDAMLQKGIPYRIYGGLRFFERAEIKDTLAYMRLMANRD 402

Query: 660 DDLTLATVLKGPLIGLTEEELFRV---AHGRRGTLWRSLVALAETEPDFRPARRYLG--- 713
           DD +   V+  P  GL E+ +  +   A     +LW++   +   +     A+  LG   
Sbjct: 403 DDTSFERVVNQPARGLGEKSVDMIRMQARQDETSLWQAASKMVVEQLLPPRAKNALGGFL 462

Query: 714 -------------DLLARTDFSAPYELFAGLLNRPCPADGRSGRRAILKRLGPDAQDPLE 760
                        DL  +TD    +   +GLL+      G  G+           ++ L+
Sbjct: 463 HLINELETSTAELDLWEQTDIVIEH---SGLLDMYSKEKGEKGQA---------RKENLQ 510

Query: 761 EFLAVCLAFE-----KTEPPSLQNFLAWLAASDAEI-KRELEQGGGTVRIMTVHGSKGLQ 814
           E +     F+       E P +    A++A +  E  + + ++   +V++MT+H +KGL+
Sbjct: 511 ELVNATREFDPDEAIPDETPDMTPLQAFIAHATLEAGETQADEYQESVQMMTLHSAKGLE 570

Query: 815 APIVFLPDTLGSPTQSPPILWPDDDCPVPLFAARRSQED--GLCAEARARANRRRDQEYR 872
            P+VF+                       LF  + S ++  GL             +E R
Sbjct: 571 FPLVFIAGV-----------------EEKLFPHQMSLDEPGGL-------------EEER 600

Query: 873 RLLYVALTRAEDRLYICGHQGKR 895
           RL YV +TRA  +LY+   + +R
Sbjct: 601 RLAYVGITRAMKQLYLTFAEKRR 623



 Score = 42.7 bits (99), Expect = 1e-07
 Identities = 46/143 (32%), Positives = 60/143 (41%), Gaps = 40/143 (27%)

Query: 16  NVAQRRA-SDPTASVWVGASAGSGKTKVLTDRVLRLM-LSGTPPARILCLTFTKAAAAEM 73
           N AQ+ A + P  ++ V A AGSGKT+VL  R+  L+ +       IL +TFT  AA EM
Sbjct: 11  NDAQKEAVTAPNKALLVLAGAGSGKTRVLVHRIAWLVQVERVSAHSILAVTFTNKAAKEM 70

Query: 74  AIRINRTLGLWATLPDDALEDRLADLCGERPSMEARLNARRLFAQVVDCPGGMKIQTIHA 133
             R+               ED LA        M AR               GM I T H+
Sbjct: 71  LGRV---------------EDMLA--------MPAR---------------GMWIGTFHS 92

Query: 134 FCQSLLRRFPLEAELAPHFDVMD 156
               LLR    +A L   F ++D
Sbjct: 93  IAHRLLRAHYRDAGLPEGFQILD 115