Pairwise Alignments

Query, 827 a.a., DNA gyrase subunit B from Azospirillum sp. SherDot2

Subject, 804 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Escherichia coli ECOR38

 Score =  835 bits (2156), Expect = 0.0
 Identities = 452/821 (55%), Positives = 579/821 (70%), Gaps = 34/821 (4%)

Query: 20  YGAESITVLRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGYCDKVEVVLN 79
           Y + SI VL+GLDAVRKRPGMYIGDTDDG+GLHHMV+EVVDNAIDEALAG+C ++ V ++
Sbjct: 5   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIH 64

Query: 80  ADGSVTVRDNGRGIPTDIHSEEGVSAAEVVMTQLHAGGKFNQNSYKVSGGLHGVGVSVVN 139
           AD SV+V+D+GRGIPT IH EEGVSAAEV+MT LHAGGKF+ NSYKVSGGLHGVGVSVVN
Sbjct: 65  ADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 124

Query: 140 ALSETLDLRIWRGGRTWTMRFRHGNAEAPLADVGEAPMVPEKGKPLSGTEVTFMPSTETF 199
           ALS+ L+L I R G+     + HG  +APLA  GE     EK    +GT V F PS ETF
Sbjct: 125 ALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET----EK----TGTMVRFWPSLETF 176

Query: 200 TNI-EFDFATLEHRLRELAFLNSGVRLLLTDARGVEPKVQDLHYEGGLEAFVSWLDRSKT 258
           TN+ EF++  L  RLREL+FLNSGV + L D R  + K    HYEGG++AFV +L+++KT
Sbjct: 177 TNVTEFEYEILAKRLRELSFLNSGVSIRLRDKR--DGKEDHFHYEGGIKAFVEYLNKNKT 234

Query: 259 ALHKPAITLKNERPTEHGGVVTVECALQWNDSYHETTLCFTNNIPQKDGGTHLAGFRAAL 318
            +H        E+       + VE ALQWND + E   CFTNNIPQ+DGGTHLAGFRAA+
Sbjct: 235 PIHPNIFYFSTEKDG-----IGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAM 289

Query: 319 TRAINNYATESGIAKKEKVSLSGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVV 378
           TR +N Y  + G +KK KVS +GDDAREGL  V+SVKVPDPKFSSQTKDKLVSSEV+  V
Sbjct: 290 TRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAV 349

Query: 379 EAVVGEALAQYFEEHPADARRVIQKVVEAAAAREAARKARDIT-RKSSLSMSSLPGKLAD 437
           E  + E LA+Y  E+P DA+ V+ K+++AA AREAAR+AR++T RK +L ++ LPGKLAD
Sbjct: 350 EQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLAD 409

Query: 438 CQERDPALSELFIVEGDSAGGSAKQGRSRQSQAILPLRGKILNVERARLDKMLGSAEIGT 497
           CQERDPALSEL++VEGDSAGGSAKQGR+R++QAILPL+GKILNVE+AR DKML S E+ T
Sbjct: 410 CQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVAT 469

Query: 498 LIAALGTGIS-DEFNADKARYHKIIIMTDADVDGSHIRTLLLTFFFRQMPDLIERGYLYI 556
           LI ALG GI  DE+N DK RYH IIIMTDADVDGSHIRTLLLTFF+RQMP+++ERG++YI
Sbjct: 470 LITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYI 529

Query: 557 AQPPLYRIKRGNAKERYLKDDRALEEYLVEAALGDLSVRL-SDGSLLIGEQLAALVEQAR 615
           AQPPLY++K+G  +E+Y+KDD A+++Y +  AL   ++   +    L GE L  LV +  
Sbjct: 530 AQPPLYKVKKGK-QEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYN 588

Query: 616 TARPAIDTLSRKVGNAMVVEQAAVAGTLSAALADDKAAAEAAAQTVAERMNGLDADGGWR 675
             +  I+ + R+   AM+ E           L+D++         V+E  +       W+
Sbjct: 589 ATQKMINRMERRYPKAMLKELIYQPTLTETDLSDEQTVTRWVNALVSELNDKEQHGSQWK 648

Query: 676 GEALPQGGY----AVIRAR-RGVTHRHLFDTDLLKSGEARRLDALAADLKRVFGTAGKAF 730
            +            ++R R  GV   +  D + +  GE RR+  L   L+ +      AF
Sbjct: 649 FDVHTNADQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLL--EEDAF 706

Query: 731 EKQKESRALTGPVALF----DTVMELGRRGVTIQRYKGLGEMNPDQLWETTLDPTKRSLL 786
            ++ E R    PVA F    D +++  RRG++IQRYKGLGEMNP+QLWETT+DP  R +L
Sbjct: 707 IERGERRQ---PVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRML 763

Query: 787 QVRVSHVDQAEEVFSTLMGDVVEPRREFIQDNALKVSNLDV 827
           +V V     A+++F+TLMGD VEPRR FI++NALK +N+D+
Sbjct: 764 RVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI 804