Pairwise Alignments

Query, 396 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 313 a.a., site-specific tyrosine recombinase XerD from Alteromonas macleodii MIT1002

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 55/302 (18%)

Query: 72  LPATPATLAAFLAHHADPPPQAGSRTTEGAPTGLSPSRLEVVRAAVRREHTRTGHPDPGA 131
           LPATP  +A +L+H+AD                L+ S L    A + + H   G PDP  
Sbjct: 41  LPATPTAIAQYLSHYADR---------------LTSSTLAHRLAVLAKWHHEYGFPDPTK 85

Query: 132 DPRIGQLLRGVRRSWAERGQSRRQVEALTASSHGDTDVPTLRLVV----EAITPAE---- 183
            P + ++++G+R + A + +  R ++           +  L++++    E+I  ++    
Sbjct: 86  APLVKKVMKGIRATHAYQTKQARPLQ-----------LEELKIIIQWLEESIKESKDYRK 134

Query: 184 -VRGVRDTALVLVGFAGALRRSELCSLTWGDVRSAAG-GLTVTLRTSKTDRDAKGQSVGI 241
            +R +R+ A++L+GF  A R  EL ++    V      G+++   T+K DRD KG +  +
Sbjct: 135 GLRLIRNKAILLLGFWRAFRADELTNIHVEYVTMIPNKGMSLYFPTTKGDRDNKGVTYKV 194

Query: 242 PRVGGPLCPVAALTAWRKAL-LAAGHTVSTSDPVFRDVSRWGHVAAAALHPSTVARIVKR 300
           P +   LCPV A   W  A  L+ G       P+F  + RWGH    ++  +T+  IV+ 
Sbjct: 195 PALQ-KLCPVTAYQDWVTAAELSKG-------PLFVGIDRWGHFNHKSMTSNTIINIVRE 246

Query: 301 LVAAVPTEGLDEELRRRLDPARYAGHSLRAGFVTTAAIEGKDIIDILMTTRHAEPRTVID 360
             +     GL       L P  ++ HSLR GF + A   G  + +++      +P+T + 
Sbjct: 247 CASGA---GL-------LHPDAFSSHSLRRGFASWADSNGWSLKELMEYVGWKDPKTALR 296

Query: 361 YV 362
           Y+
Sbjct: 297 YI 298