Pairwise Alignments

Query, 288 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

Subject, 269 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  133 bits (335), Expect = 4e-36
 Identities = 90/269 (33%), Positives = 136/269 (50%), Gaps = 17/269 (6%)

Query: 14  DWVAVRRDAETGIETIRAHFRGHAYDLHDHDELLVGVTEQGVQAFRCRRRLHTSVPGRVI 73
           DW+  R    +G++ I A+F G A+D H HD   +G T  GVQ+F  R  +  S+PG  +
Sbjct: 9   DWLH-RAPHASGLDRIEAYFAGFAFDPHRHDTYAIGRTLTGVQSFHYRGDMIHSLPGMTM 67

Query: 74  LIEPGEAHDGHSPGEDGFTYAMLYLPVPLLTARSEALRSLTPRGTGLPLGFRDT-LADDP 132
           ++ P E HDGH+  ++GF Y M+Y+   L+    + L        G PL F  + L+ DP
Sbjct: 68  VLHPDETHDGHAGSDEGFKYRMIYVEPSLI---QQILG-------GKPLPFIPSGLSTDP 117

Query: 133 GLAATIRSAFLALHQREGRLARDLSLDRL--AARLVGHLAPPEERRPQRPDRAALLVRDL 190
            L    R++ + L   +  L      D L   A  + +++     R      AA   R+ 
Sbjct: 118 RL---FRASEVLLQNLDNPLDPLQEQDALFDLAHALSNVSGGIVSRKAFDYVAAERAREF 174

Query: 191 LHARMAEDVGLDALSAAAGVDRFRLNRGFRAAFGLSPHAYLVRLRLRTARRRLADGEAPA 250
           +H+ +   + LD ++  AG DR+ L+R FR  FG SP+ YL   RL   R  LA G++  
Sbjct: 175 IHSALGRSITLDEMADHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSLV 234

Query: 251 LVAAEVGFADQSHLGRWFRRAYGLTPAAY 279
             A   GF DQSH+ R FR  YG+ P+ +
Sbjct: 235 DAALTAGFTDQSHMTRQFRSTYGMPPSRW 263