Pairwise Alignments

Query, 418 a.a., Transcription termination factor Rho from Azospirillum sp. SherDot2

Subject, 419 a.a., transcription termination factor Rho from Erwinia tracheiphila SCR3

 Score =  588 bits (1517), Expect = e-173
 Identities = 289/418 (69%), Positives = 356/418 (85%)

Query: 1   MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDIPIFGDGVLEVLQD 60
           M+L ELK    ++L+   E + +EN + +RKQD++FAILKQ A++   IFGDGVLE+LQD
Sbjct: 1   MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD 60

Query: 61  GFGFLRSPESNYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRSPKDGERYFALLKVNTIN 120
           GFGFLRS +S+YL GPDDIYVSPSQ+RRF LRTGDT+ G+IR PK+GERYFALLKVN +N
Sbjct: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN 120

Query: 121 FDAPDKVRHRINFDNLTPLYPEERIRMEVEDPTKKNLTGRIVDLVAPLGKGQRGLIVAPP 180
           +D P+  R +I F+NLTPL+   R+RME  + + ++LT R++DL +P+G+GQRGLIVAPP
Sbjct: 121 YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP 180

Query: 181 RTGKTVMLQNIAHSIATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV 240
           + GKT++LQNIA SIA NHP+  L+VLLIDERPEEVT+M R V+GEVI+STFDEPA+RHV
Sbjct: 181 KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV 240

Query: 241 QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF 300
           QVAEMVIEKAKRLVEHK+DV+ILLDSITRLARAYNTVVP+SGKVLTGGVDANAL RPKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300

Query: 301 FGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI 360
           FGAARNVEEGGSLTIIATAL+DTGS+MDEVI+EEFKGTGN E+ L RK+++KR FPAID 
Sbjct: 301 FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY 360

Query: 361 SKSGTRKEELLVDKGTMSKMWILRRILMPMGVTDAVDFLVDKLKHTKSNNEFFESMNQ 418
           ++SGTRKEELL     + KMWILR+I+ PMG  DA++FL++KL  TK+N+EFF+ M +
Sbjct: 361 NRSGTRKEELLTSSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKR 418