Pairwise Alignments

Query, 510 a.a., Competence protein ComM from Azospirillum sp. SherDot2

Subject, 467 a.a., AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination from Variovorax sp. SCN45

 Score =  353 bits (906), Expect = e-102
 Identities = 220/480 (45%), Positives = 276/480 (57%), Gaps = 33/480 (6%)

Query: 48  VRAALHALGLALPA-KRITVNLAPADVLKEGSHFDLPIALGLLTVMGVLPDAEIARYVAL 106
           VR+A+   GL  P  K+I VNLAPAD+ K+   FDLPIALG+L   G + +A +A +   
Sbjct: 1   VRSAIQNAGLEYPNNKKIVVNLAPADLPKDSGRFDLPIALGILAASGQIDNARLAGHEFA 60

Query: 107 GELALDGALTPVAGVLPAAIDALANDRG----LICPAACGGEAAWAGPDLDVLAPANLLA 162
           GEL+L G L PV G L  A+    + RG    L+ P     EAA   P  +V    +LL 
Sbjct: 61  GELSLSGELRPVRGALAMAL--ALHTRGVATRLVLPLDSAHEAALV-PGSEVYGARHLLD 117

Query: 163 LINHF-----KGTQVLTPPKPRMQEQDAPP-------PDLRDVKGNETAKRALEVAAAGS 210
           ++  F       +Q   PP        A P        DL DVKG+  AKRALE+AAAG 
Sbjct: 118 VVRQFVVDTEAASQWPDPPPDGWARVHAAPGASAPRYADLADVKGHAGAKRALEIAAAGG 177

Query: 211 HNLLMIGPPGSGKSMLAARLPGLLPPLDPAEALEVSMIHSVGGLLEDGRLLRQRPYRAPH 270
           H+LLM+G PGSGKSMLA R  GLLP +   EALE + + S+GG     R +  RP  APH
Sbjct: 178 HSLLMMGEPGSGKSMLAQRFAGLLPAMSIDEALESAAVASLGGRFATERWML-RPTSAPH 236

Query: 271 QSASLPALVGGGTRAKPGEISLAHQGVLFLDELPEFPRALLEALRQPLETGKAVVSRANH 330
            ++S  ALVGGG+  +PGEIS AH GVLFLDE PEF R+ LEALR+PLETG   ++RA  
Sbjct: 237 HTSSAVALVGGGSPPRPGEISRAHHGVLFLDEFPEFARSALEALREPLETGTITIARAAR 296

Query: 331 HVTYPARVQLVAAMNPCRCGHLDDA-SLACARAPKCAADYQSKISGPLFDRIDLHIDVPA 389
              +PAR QL+AAMNPC CG+L    S AC   P   + YQ K+SGPL DRIDLHI+VPA
Sbjct: 297 SAEFPARFQLIAAMNPCPCGYLGSTKSKACRCTPDQISRYQGKLSGPLLDRIDLHIEVPA 356

Query: 390 VSPADLSLPPPAEGSAAIAARVAVARAIQAERYGGFGPYPAGRAVRTNAEADGELLEKVA 449
           VS   L   PP E + +I +RV VAR    +R G             N    G  ++K A
Sbjct: 357 VSAQQLLDAPPGESTESIRSRVIVARERAMQRQG-----------YANQSLQGSAIDKHA 405

Query: 450 SPDAPGRALLTEAAERLKLSARGYHRVMRVGRTLADLDGVEGVRRLHIAEALSYRRIAPG 509
             D   R  +  AA +L  SAR  HR ++V RT+ADL   E V+  H+AEA+ YRR   G
Sbjct: 406 GLDDAARKFMFNAAAKLGWSARSTHRALKVARTIADLGSAEAVQVEHLAEAVQYRRALRG 465