Pairwise Alignments

Query, 306 a.a., Ribosomal RNA small subunit methyltransferase I from Azospirillum sp. SherDot2

Subject, 300 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Ralstonia solanacearum UW163

 Score =  184 bits (467), Expect = 2e-51
 Identities = 117/281 (41%), Positives = 156/281 (55%), Gaps = 6/281 (2%)

Query: 28  AGGLYVVATPIGNAADITLRALDTLKRADAIACEDTRVTAKLMGIHGIHTPFVSYHEHNA 87
           AG LYVVATPIGN AD++LRA   L  ADA+ACEDTR T +L+   G+  P ++ HEHN 
Sbjct: 17  AGALYVVATPIGNVADVSLRARHVLGLADAVACEDTRNTGQLLHRLGLSRPMLAAHEHNE 76

Query: 88  AKMRPILIGRMKKGEAIALVTDAGTPLVSDPGYKLVRECVAEGVAVTTLPGASAPLVALV 147
            +    ++ R+ +GE IA V+DAGTP VSDPG ++V    A G  V  LPGASA + AL 
Sbjct: 77  REAAARIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGHRVIPLPGASAVVTALS 136

Query: 148 LSG----LPTDRFLFAGFLPNKSSARRATAGELKGVPATLVFFESPQRLPESLADLADIL 203
            +G        +F F GFLP K+  R A   +        V +E+P R+  +LA LA+ L
Sbjct: 137 AAGELLETSAGQFTFVGFLPPKAGQREAAIRQWAAHGPAWVLYEAPHRIEATLAALAERL 196

Query: 204 GPREAAVARELTKLYEEVRRGTLPELAAHY-AEAGPPRGEVVLVI-GPPGEEATPGEADV 261
             R   + RELTKL+E++      E  A   A+A   +GE VLV+ G   +EA P     
Sbjct: 197 PARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVLVVEGAGAQEAAPTAMAA 256

Query: 262 DALLREALTRLSVRDAAADVAARTGQHKRTVYARALELQRE 302
           D +LR  L  L  + AA    A TG     +Y  AL L+ +
Sbjct: 257 DQVLRLLLAELPAKRAAKLAGAITGAPVDALYQSALALKND 297