Pairwise Alignments

Query, 306 a.a., Ribosomal RNA small subunit methyltransferase I from Azospirillum sp. SherDot2

Subject, 286 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Escherichia coli ECRC98

 Score =  203 bits (517), Expect = 3e-57
 Identities = 121/276 (43%), Positives = 163/276 (59%), Gaps = 6/276 (2%)

Query: 29  GGLYVVATPIGNAADITLRALDTLKRADAIACEDTRVTAKLMGIHGIHTPFVSYHEHNAA 88
           G LY+V TPIGN ADIT RAL+ L+  D IA EDTR T  L+   GI+    + H+HN  
Sbjct: 12  GQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQ 71

Query: 89  KMRPILIGRMKKGEAIALVTDAGTPLVSDPGYKLVRECVAEGVAVTTLPGASAPLVALVL 148
           +    L+ ++++G+ IALV+DAGTPL++DPGY LVR C   G+ V  LPG  A + AL  
Sbjct: 72  QKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSA 131

Query: 149 SGLPTDRFLFAGFLPNKSSARRATAGELKGVPATLVFFESPQRLPESLADLADILG-PRE 207
           +GLP+DRF + GFLP KS  RR     ++  P TL+F+ES  RL +SL D+  +LG  R 
Sbjct: 132 AGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRY 191

Query: 208 AAVARELTKLYEEVRRGTLPELAAHYAE-AGPPRGEVVLVIGPPGEEATPGEADVDALLR 266
             +ARELTK +E +    + EL A   E     +GE+VL++   G +A   +   DAL  
Sbjct: 192 VVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIV--EGHKAQEEDLPADALRT 249

Query: 267 EAL--TRLSVRDAAADVAARTGQHKRTVYARALELQ 300
            AL    L ++ AAA  A   G  K  +Y  ALE Q
Sbjct: 250 LALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQ 285