Pairwise Alignments

Query, 234 a.a., Octopine transport system permease protein OccQ from Azospirillum sp. SherDot2

Subject, 230 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  184 bits (468), Expect = 1e-51
 Identities = 102/229 (44%), Positives = 143/229 (62%), Gaps = 1/229 (0%)

Query: 5   LSFGPNGWGGQLLMGTAMTVAVAVSAFAFGILVGSLGASAKLSHSLALNVVADVYTTIVR 64
           ++F   G+G  L  G  MTV +A++A   G+++G  GA AK S   +L  V   Y+TIVR
Sbjct: 1   MNFDLYGFGPALAAGALMTVKLALTALCLGLVLGLAGALAKTSAHKSLQWVGGAYSTIVR 60

Query: 65  GIPELLVIYLLFFGGSGVATSIASAFGYDGRVDLNAFTIGVLAVGLISGAYSTEVIRGAV 124
           G+PELL + L++FG   V   +   FG    + L+AF  GV+A+GL  GAY+TEV+RGA+
Sbjct: 61  GVPELLWVLLIYFGTINVVRELGEVFGIPD-LSLSAFAAGVIALGLCYGAYATEVLRGAI 119

Query: 125 QSVPFGQIEAARACGMSRWLILRRVLVPQTLRFALPGLGNVWQLTLKDTALVSVTALAEL 184
            ++P G  EA  A G+S+  I  R+++PQ  R ALPGLGN++ + +KDTALV+V  L E+
Sbjct: 120 IAIPKGHREAGLALGLSKTRIFTRLIMPQMWRIALPGLGNLFMILMKDTALVTVIGLEEI 179

Query: 185 MRITHLAAGATRQPFLFYSTAAVLYLMLTTISTALFNRAEISANRGVRR 233
           MR   +A   TRQPF FY  AA +YL LT++S    +  E  A RG  R
Sbjct: 180 MRHAQIAVTVTRQPFTFYLVAAFIYLGLTSLSMVGMHFLEQRAARGFVR 228