Pairwise Alignments

Query, 281 a.a., Nopaline-binding periplasmic protein from Azospirillum sp. SherDot2

Subject, 260 a.a., Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  154 bits (390), Expect = 1e-42
 Identities = 106/282 (37%), Positives = 155/282 (54%), Gaps = 30/282 (10%)

Query: 1   MKKIVSALALGAMMAVAAAGAAGAKEWKTVRIASEGAYPPWNATDTSGKLTGFEVDLGND 60
           MKK V AL+L  ++ + A  A+ A   +TVRI ++  Y P+++ D  G+  GF++DLGN+
Sbjct: 1   MKKTVLALSL--LIGLGATAASYAALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNE 58

Query: 61  LCKRMKVTCEFVAQDWDGIIPALQQGKYDAIMSAMTITDERKKVIDFSVPYGTEPSVFAV 120
           +CKRM+V C +VA D+D +IP+L+  K DAI+S+++ITD+R++ I FS       S    
Sbjct: 59  MCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIA 118

Query: 121 VTGSPLAKALNLGADRVDLNDQGKAKPVLDKLAEALKGKSVGV-QVSTIQADFMDKHLPK 179
             GSP+   L                       E+LKGK VGV Q ST +A   D    K
Sbjct: 119 AKGSPIQPTL-----------------------ESLKGKHVGVLQGSTQEAYANDNWRTK 155

Query: 180 -VTMRTYDKIDNAGIDLGSGRVDAMLGDR-SVVEAVVKATPDK-MVIVGPNFIG-GVIGE 235
            V +  Y   D    DL +GR+DA L D  +  E  +K    K     GP+       G+
Sbjct: 156 GVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGD 215

Query: 236 GMGVGLRKDTADLKAMFDKAIGEALKDGTVKKLSTQHFGYDI 277
           G GVGLRKD  +LKA FDKA+ E  +DGT  K++ ++F +++
Sbjct: 216 GTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNV 257