Pairwise Alignments

Query, 281 a.a., Nopaline-binding periplasmic protein from Azospirillum sp. SherDot2

Subject, 259 a.a., transporter substrate-binding domain-containing protein from Bosea sp. OAE506

 Score =  185 bits (470), Expect = 8e-52
 Identities = 114/276 (41%), Positives = 158/276 (57%), Gaps = 25/276 (9%)

Query: 1   MKKIVSALALGAMMAVAAAGA-AGAKEWKTVRIASEGAYPPWNATDTSGKLTGFEVDLGN 59
           MK     +A+  + AV A+GA A AKEWK VRI +EGAYPP+N  +   +L GFE+D GN
Sbjct: 1   MKGFARVIAVALLTAVGASGALAQAKEWKEVRIGTEGAYPPFNNLNAKKELEGFEIDYGN 60

Query: 60  DLCKRMKVTCEFVAQDWDGIIPALQQGKYDAIMSAMTITDERKKVIDFSVPYGTEPSVFA 119
            LC+RMKV C +V QDWDGIIPAL   KYD I++ M  TDERKK +DF+          +
Sbjct: 61  LLCERMKVKCTWVVQDWDGIIPALLSNKYDIIIAGMNATDERKKRVDFT----------S 110

Query: 120 VVTGSPLAKALNLGADRVDLNDQGKAKPVLDKLAEALKGKSVGVQVSTIQADFMDKHLPK 179
           V T +P+     +G       D   A         ALKGK++GVQ ST+ +++++K    
Sbjct: 111 VYTKTPI---WIIGPKTTTSTDVSPA---------ALKGKAIGVQGSTVHSNYVEKVYKD 158

Query: 180 VTMRTYDKIDNAGIDLGSGRVDAMLGDRSVVEAVVKAT-PDKMVIVGPNFIGGVI-GEGM 237
            T R Y   + A +DL SGR+D ++ D   +E  +     D    +G       I G G+
Sbjct: 159 STARPYPTQEEANLDLLSGRLDYIIADSLSLEDFLNGKGKDCCKKIGEITRDPAIHGPGV 218

Query: 238 GVGLRKDTADLKAMFDKAIGEALKDGTVKKLSTQHF 273
           G  +RKD   LKA+FDKAI E + DG+ KK++ ++F
Sbjct: 219 GGAVRKDDTALKALFDKAIAETIADGSHKKIADKYF 254