Pairwise Alignments

Query, 867 a.a., Chaperone protein ClpB from Azospirillum sp. SherDot2

Subject, 857 a.a., protein disaggregation chaperone from Escherichia coli BL21

 Score =  990 bits (2560), Expect = 0.0
 Identities = 510/846 (60%), Positives = 650/846 (76%), Gaps = 4/846 (0%)

Query: 1   MDFEQYTERSRGFIQAAQTLAVRRGHQRLTPEHLLKTLLDDKEGLAANLIRAAGGDPKAA 60
           M  ++ T + +  +  AQ+LA+   +Q + P HL+  LL+ + G  + L+ +AG +    
Sbjct: 1   MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60

Query: 61  LSAVDAELDKLPKVEGSGAGQLYLTPELSRVFEQAEKVAEKAGDSFVTAERILLALAMAD 120
            + ++  L++LP+VEG+G G +  + +L RV    +K+A+K GD+F+++E  +LA   + 
Sbjct: 61  RTDINQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119

Query: 121 GTPSGKALKSAGVTPQALNTAINDIRKGRTADSASAEQGYDALKKYARDLTAAARDGKLD 180
           GT +   LK+AG T   +  AI  +R G + +   AE    ALKKY  DLT  A  GKLD
Sbjct: 120 GTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178

Query: 181 PVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKNKQLL 240
           PVIGRDEEIRRTIQVL RRTKNNPVLIGEPGVGKTAIVEGLAQRI+ G+VPEGLK +++L
Sbjct: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238

Query: 241 SLDLGALVAGAKYRGEFEERLKAVLSEIQAAAGEIVVFIDELHTLVGAGKSDGAMDASNM 300
           +LD+GALVAGAKYRGEFEERLK VL+++    G +++FIDELHT+VGAGK+DGAMDA NM
Sbjct: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298

Query: 301 LKPALARGELHCVGATTLDEFRKYIEKDAALARRFQPVFVSEPTVEDTISILRGLKERYE 360
           LKPALARGELHCVGATTLDE+R+YIEKDAAL RRFQ VFV+EP+VEDTI+ILRGLKERYE
Sbjct: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358

Query: 361 VHHGVRITDSAIVSAATLSNRYITDRFLPDKAIDLIDEAASRLRMAVDSKPEAIDELDRR 420
           +HH V+ITD AIV+AATLS+RYI DR LPDKAIDLIDEAAS +RM +DSKPE +D LDRR
Sbjct: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418

Query: 421 IIQLKIEREALKREQDSASRDRLVNLERELSDLEQESAELTAKWQAEKDQLQGAQKIKED 480
           IIQLK+E++AL +E D AS+ RL  L  ELSD E++ +EL  +W+AEK  L G Q IK +
Sbjct: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478

Query: 481 LEKARTELETAQRDGNWGRAGELAYGVIPGLEKALKDAE--EHASSRMLNEEVRDSDIAA 538
           LE+A+  +E A+R G+  R  EL YG IP LEK L+ A   E  + R+L  +V D++IA 
Sbjct: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538

Query: 539 VVSRWTGVPVDKMLAGEREKLLAMEDKLRGRVIGQDEAIVAVSNAVRRARAGLQDPNRPI 598
           V++RWTG+PV +M+  EREKLL ME +L  RVIGQ+EA+ AVSNA+RR+RAGL DPNRPI
Sbjct: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598

Query: 599 GSFLFLGPTGVGKTELTKALAEFLFDDETAMVRLDMSEYMEKHSVARMIGAPPGYVGYEE 658
           GSFLFLGPTGVGKTEL KALA F+FD + AMVR+DMSE+MEKHSV+R++GAPPGYVGYEE
Sbjct: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658

Query: 659 GGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVVIIMTS 718
           GG LTEAVRRRPY V+L DEVEKAHPDVFN+LLQVLDDGRLTDGQGRTVDFRN V+IMTS
Sbjct: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718

Query: 719 NLGSQALAEQAEGEDSAAVRDEVMEAVRAHFRPEFLNRLDEILLFHRLDRRHMGGIVKIQ 778
           NLGS  + E+    D A +++ V+  V  +FRPEF+NR+DE+++FH L  +H+  I +IQ
Sbjct: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778

Query: 779 LGRLTKMLADREITLTVDEAATQWLADAGYDPVYGARPLKRVIQRELQNPMATLILEGRI 838
           L RL K L +R   + + + A + L++ GYDPVYGARPLKR IQ++++NP+A  IL G +
Sbjct: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838

Query: 839 KDGQTV 844
             G+ +
Sbjct: 839 VPGKVI 844