Pairwise Alignments

Query, 548 a.a., IS66 family transposase ISAzs21 from Azospirillum sp. SherDot2

Subject, 537 a.a., IS66 family transposase ISEc23 from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  427 bits (1097), Expect = e-124
 Identities = 244/530 (46%), Positives = 321/530 (60%), Gaps = 16/530 (3%)

Query: 13  AALRQLVAEQAVRLHAQEAALRAKD-------AALGAALEGIKSKALEIEKLKLQLARLR 65
           A L +L++EQA  L  ++  L   +       +AL  A E I+    EIE L+ Q+ +LR
Sbjct: 10  AELERLLSEQAEALRQKDQQLSLVEETEAFLRSALTRAEEKIEEDEREIEHLRAQIEKLR 69

Query: 66  RMHFGQSSEKLGRTIAQLELALEDLEAAEGEQAAIVAEADAPPEDADTKRRPKRTLPPDH 125
           RM FG  SEKL R   ++ELA   L+  E +        D P      ++   R   P H
Sbjct: 70  RMLFGTRSEKLRR---EVELAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPAH 126

Query: 126 LPREERVHEPNSGTCTCAQCGGALRRLGEDRARQLEYVPAHFKVVEHVRPKFSCRRCEAI 185
           LPRE    EP    C   +CGG L  LGE  A QLE V +  KV+   R K +C +C+ I
Sbjct: 127 LPREIHRLEPEESCCP--ECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCI 184

Query: 186 TQAPA-SLPIERGLFGPGLLAHLLVSKFDDHLPLYRQAEIFARLGVELSRSTLADQVGHA 244
            +APA S PIERG+ GPGLLA +L  K+ +HLPLYRQ+EIFAR GVELSR+ L++ V   
Sbjct: 185 VEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDAC 244

Query: 245 VRLLRPLIQAIETSVTGSAKLHADDTPVPVLSPGAGRTKTGYLWVYLRDDRPWNGPSPPA 304
            +L+ P+  A+   V  + K+H DDTPV VL+PG  + KTG +W Y+RDDR     SPPA
Sbjct: 245 CQLMTPVNDALYRYVMNTRKIHTDDTPVKVLAPGQKKAKTGRIWTYVRDDRNVGSSSPPA 304

Query: 305 ALYRYSPGRSGEHPCGRLKDFHGALQADGYAGFNGLYEPGPDGWARIIEVACMAHGRRKF 364
             + YSP R G+HP   L+ F G LQAD + G++ L+    +G A + EVAC AH RRK 
Sbjct: 305 VWFAYSPNRQGKHPEQHLRPFRGILQADAFTGYDRLFSAEREGGA-LTEVACWAHARRKI 363

Query: 365 HDVAVSAKGKAPIAAEALRRIGELYAVEAGIAGQDADERRRVRQAEAAPKMAALKAWLEE 424
           HDV +S+  K+  A EAL+RI ELYA+E  I G    ER  VRQ  +   + +L  W+ E
Sbjct: 364 HDVYISS--KSATAEEALKRISELYAIEDEIRGLPESERLAVRQQRSKVLLTSLHEWMVE 421

Query: 425 TLGRLDSKSDTAKAVRYMLNRWTALTRYLDDGRLEIDNNAAERALRAIVLGRKNRLFAGA 484
             G L  KS   +A  Y+LN+W AL  Y DDG  E DNNAAERALRA+ LG+KN +F G+
Sbjct: 422 KNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNAAERALRAVCLGKKNFMFFGS 481

Query: 485 DVGGERAAAMYTLIETAKLNGLDPEAYLRDVIARIADHKISRIDELLPWN 534
           D GGER A +Y LI T +LNG+DPEAYLR +++ + +   +R+DELLPWN
Sbjct: 482 DHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWN 531