Pairwise Alignments

Query, 294 a.a., Spermidine/putrescine transport system permease protein PotB from Azospirillum sp. SherDot2

Subject, 285 a.a., Spermidine/putrescine transport system permease protein PotB from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  176 bits (445), Expect = 7e-49
 Identities = 101/265 (38%), Positives = 155/265 (58%), Gaps = 6/265 (2%)

Query: 15  VILLAVAVWLALLVLLPQLMMIGFSFRPSLPPSKIGGPEDVFTVRNYLTLWTNQIHLSIF 74
           V+++ +  WL L V LP LM+IG SF      S +   + VFT+ NY  L  + ++  + 
Sbjct: 10  VVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV---KMVFTLDNYTRL-LDPLYFEVL 65

Query: 75  LKTIWASALVTATTLAVCYPVAYYLAQVAPKRRLPLLILMLVVPFWINELLRTFSWYIIL 134
           L ++  + + T   L + YP A++LA++  K R PLL+ +L+VPFW N L+R +   I L
Sbjct: 66  LHSLNMALIATLACLVLGYPFAWFLAKLPHKVR-PLLLFLLIVPFWTNSLIRIYGLKIFL 124

Query: 135 AFNGPLNAILLGLGIIDEPQRFLGGDAGVIVGMVYVYILFMVFPLYNAIESLDRNQIEAA 194
           +  G LN  LL LG+ID P R +   + VI+G+VY+ + FMV PLY++IE LD+  +EAA
Sbjct: 125 STKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAA 184

Query: 195 RDLGAGWLRIHRRIVLPHAKPGVAVGCIMTFMLAAGSYAVPALLGGPNSRWFTEIIYNWF 254
           RDLGA  L+   RI++P   PG+  GC++  + A G + V  L+GG  +     +I   F
Sbjct: 185 RDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQF 244

Query: 255 FEGGNWNQGAAYAFILLVLCIGFIL 279
               +W  GAA + I L + +G +L
Sbjct: 245 LNIRDWPFGAATS-ITLTIVMGLML 268