Pairwise Alignments

Query, 275 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 281 a.a., putrescine ABC transporter permease PotI from Escherichia coli ECOR27

 Score =  143 bits (360), Expect = 5e-39
 Identities = 94/258 (36%), Positives = 147/258 (56%), Gaps = 10/258 (3%)

Query: 15  LMLFFGYLFLPLGIMAAATFNSSRFPTVTPWMGFTLGWFQALWEDQRMWAALGTSLLVGA 74
           L+L F +L+ P+ ++   +FNSS+  TV  W G++  W+  L  D  M +A+G SL + A
Sbjct: 16  LLLGFTFLYAPMLMLVIYSFNSSKLVTV--WAGWSTRWYGELLRDDAMMSAVGLSLTIAA 73

Query: 75  GVIALAVPLGLAAALLLDRLHSRAKTVLYALMVS-PLLTPGVIVGISTLVFWREWFGVSG 133
                A  LG  AA++L R      +  +A M++ PL+ P VI G+S L+ +       G
Sbjct: 74  CAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIG 133

Query: 134 -----GLFLTVVAQSSFIAAYAMLLFSARLERFDPALEEAALDLGATHGQVFRRITLPYL 188
                G+    +A  +F  AY  ++ S+RL   D ++EEAA+DLGAT  +VF  ITLP +
Sbjct: 134 WPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMI 193

Query: 189 MPAILSAALLAFLQSFENYNTTLFVRGLD-TTLTVYIATKVRTGLTPAVNAL-SLVLIAL 246
           MPAI+S  LLAF  S ++     FV G   TTL + + + VR G+ P +NAL +L+L A+
Sbjct: 194 MPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILGAV 253

Query: 247 TVLGAVVYEILRRREARR 264
            ++G + + ++ R E +R
Sbjct: 254 GIVGFIAWYLMARAEKQR 271