Pairwise Alignments

Query, 275 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 281 a.a., Inner membrane ABC transporter permease protein YdcV from Escherichia fergusonii Becca

 Score =  143 bits (360), Expect = 5e-39
 Identities = 94/258 (36%), Positives = 147/258 (56%), Gaps = 10/258 (3%)

Query: 15  LMLFFGYLFLPLGIMAAATFNSSRFPTVTPWMGFTLGWFQALWEDQRMWAALGTSLLVGA 74
           L+L F +L+ P+ ++   +FNSS+  TV  W G++  W+  L  D  M +A+G SL + A
Sbjct: 16  LLLGFTFLYAPMLMLVIYSFNSSKLVTV--WAGWSTRWYGELLRDDAMMSAVGLSLTIAA 73

Query: 75  GVIALAVPLGLAAALLLDRLHSRAKTVLYALMVS-PLLTPGVIVGISTLVFWREWFGVSG 133
                A  LG  AA++L R      +  +A M++ PL+ P VI G+S L+ +       G
Sbjct: 74  CAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIG 133

Query: 134 -----GLFLTVVAQSSFIAAYAMLLFSARLERFDPALEEAALDLGATHGQVFRRITLPYL 188
                G+    +A  +F  AY  ++ S+RL   D ++EEAA+DLGAT  +VF  ITLP +
Sbjct: 134 WPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMI 193

Query: 189 MPAILSAALLAFLQSFENYNTTLFVRGLD-TTLTVYIATKVRTGLTPAVNAL-SLVLIAL 246
           MPAI+S  LLAF  S ++     FV G   TTL + + + VR G+ P +NAL +L+L A+
Sbjct: 194 MPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILGAV 253

Query: 247 TVLGAVVYEILRRREARR 264
            ++G + + ++ R E +R
Sbjct: 254 GIVGFIAWYLMARAEKQR 271