Pairwise Alignments

Query, 694 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 571 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  295 bits (754), Expect = 5e-84
 Identities = 180/376 (47%), Positives = 248/376 (65%), Gaps = 8/376 (2%)

Query: 322 AVLIVLVSLGCVALGCVVAWKVGDGIARPVSAVTVAMDRLAAGDLAVTVPGADRDDEAGG 381
           AV     +LG +AL  ++A  VG GI RP+  VT A+DRL + D +V +    R DE G 
Sbjct: 184 AVEFGAAALGILALVWLIAAWVGRGITRPLGDVTGALDRLTSDDHSVEIRHTGRTDEIGA 243

Query: 382 MARAVEVFK---EGLVRAKELD-RQQQADWHAKEVRVAALADLQKSFEVRVGGLTGALAS 437
           +AR ++VF+   E   RA E   RQQ+AD  A++ R+AAL      F+ +V G+  ++ +
Sbjct: 244 LARGLKVFQTHIEAAARAAEEKLRQQEADL-ARQSRIAALTS---EFDAKVAGVIKSVGA 299

Query: 438 SAQQLESTARALTGIADQSLGRSEQVAASASAAADSVQTAAAATEELSASVQDIGRQVAD 497
           +A Q++ST+++++ IADQ+  +S  VAA+A+ AA SVQT AAATEEL AS  +I RQV  
Sbjct: 300 AAAQMQSTSQSMSAIADQTARQSTAVAAAANHAAMSVQTVAAATEELHASEAEIARQVEV 359

Query: 498 SARIADAAVSDVKRADEAVTVLAESAERIGAVVELINSIAGQTNLLALNATIEAARAGEA 557
           S   +  AV + +R+ E V+ L  +A RIG VV LIN IA QTNLLALNATIEAARAGEA
Sbjct: 360 STSRSRTAVQEAERSSEIVSGLNSAAGRIGEVVALINDIASQTNLLALNATIEAARAGEA 419

Query: 558 GKGFAVVASEVKGLANQTAKATEDIVAQIKGIRDATQEAVTAVHGINETIAQVSRIASGI 617
           GKGFAVVA+EVK LANQTA+AT++I +QI  ++ A   A  A+  I  TIA++   +S +
Sbjct: 420 GKGFAVVANEVKNLANQTARATDEISSQIGEVQSAATLAAEAIAAIVNTIAEIDETSSVV 479

Query: 618 AAAVDQQAAATQEIARSVIRAADGAQEVSGGMGNIRAGAGETGAAADQLLAAAAALAGQS 677
           A AVDQQ+AAT EIARS+ +AA G  EVS  +G +   A   G+ A ++LAAAA L GQ+
Sbjct: 480 AIAVDQQSAATTEIARSIEQAATGTAEVSNNIGEVSDAARHAGSTASEVLAAAAELTGQA 539

Query: 678 KDLTREIDGFIAGVRK 693
             L  E++ F+  + +
Sbjct: 540 DALRTEVEQFLNAIHQ 555