Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 417 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Pseudomonas fluorescens SBW25

 Score =  178 bits (451), Expect = 2e-49
 Identities = 103/315 (32%), Positives = 168/315 (53%), Gaps = 24/315 (7%)

Query: 13  LALGAVIAVLP-AFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFGIGAY 71
           + +G ++A L   F  +   +DIA L     ++ +GLN+++G AG + LG+ GF+ +GAY
Sbjct: 93  IIIGLIVAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 152

Query: 72  ASGVLVGTYGWPPIVALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVSIVLRT 131
              +L    GW   + L           FL+  P+LRL+G YLA+ TLG G I+ + LR 
Sbjct: 153 TYALLSHYLGWSFWICLPLAGMAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 212

Query: 132 ESGLTGGPDGMMVEPFRIF-----------GVELYGEK-----------VWYWVVGVLLV 169
            + +TGGP+G+   P   F           G++ + E            V+ ++V +LL 
Sbjct: 213 LTDITGGPNGISSIPKPTFFGLSFDRTAAEGMQTFHEYFGIDYNPVSKVVFLYLVALLLA 272

Query: 170 GVVWLSLN-LIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVAGSLFAH 228
                 +N L+  P+GRA  A+   E+A   +G++    K+  F L A FA  AGS FA 
Sbjct: 273 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAA 332

Query: 229 YAGLITPAKADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTIFQDYQQIVLGG 288
             GL+TP    F +S  ++ +VV GGM S  G ++ A+V+ LLP+ +  F +Y+ ++ G 
Sbjct: 333 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEYRMLMFGA 392

Query: 289 ILMATMVFMPKGLLP 303
           +++  M++ P+GLLP
Sbjct: 393 MMVLMMIWRPQGLLP 407