Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 425 a.a., branched chain amino acid ABC transporter permease LivM from Escherichia coli ECOR27

 Score =  177 bits (448), Expect = 5e-49
 Identities = 110/315 (34%), Positives = 175/315 (55%), Gaps = 34/315 (10%)

Query: 18  VIAVLPAFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFGIGAYASGVLV 77
           V+AV   F+ +   +DIA L     ++ +GLN+++G +G + LG+ GF+ IGAY   +L 
Sbjct: 98  VLAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLN 157

Query: 78  GTYG---WP--PIVALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVSIVLRTE 132
             YG   W   PI  L+A AA      FL+  P+LRL+G YLA+ TLG G IV I+L   
Sbjct: 158 HYYGLGFWTCLPIAGLMAAAA-----GFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNN 212

Query: 133 SGLTGGPDGMMVEPF-RIFGVEL---------------YGEK-------VWYWVVGVLLV 169
           + +TGGP+G+   P    FG+E                +G K       ++ ++V +LLV
Sbjct: 213 TEITGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLV 272

Query: 170 GVVWLSLN-LIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVAGSLFAH 228
            +    +N L+  P+GRA  A+   E+A   +G+   R K+  F +SA FA  AG+LFA 
Sbjct: 273 VLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAA 332

Query: 229 YAGLITPAKADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTIFQDYQQIVLGG 288
             G ++P    F +S  ++ +VV GGM S F  ++ A++L +  + +  F +Y  ++LGG
Sbjct: 333 RQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG 392

Query: 289 ILMATMVFMPKGLLP 303
           +++  M++ P+GLLP
Sbjct: 393 LMVLMMIWRPQGLLP 407