Pairwise Alignments

Query, 725 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  275 bits (702), Expect = 1e-77
 Identities = 162/384 (42%), Positives = 223/384 (58%), Gaps = 15/384 (3%)

Query: 339  EEVRNRERLEEALRQSQKMEALGQLTGGVAHDFNNLLTAALANLHLLSR---HLPADGQR 395
            E      + EE LRQSQKMEA+GQLTGG+AHDFNNLL A  + L L+SR   H P + + 
Sbjct: 891  ERAATLRKTEEQLRQSQKMEAVGQLTGGMAHDFNNLLQAMSSCLQLVSRRVGHAP-EVEP 949

Query: 396  FLGGARTALERAEKLTRQLLSFSRQDAVNPTVVDLGDSLRRMADLLERSIRADVVLEWDI 455
             L   R A++R   L RQL++FSR+ ++ P   D+ D L  +   L+R++RAD+ LE+ +
Sbjct: 950  ILDAGRQAVDRGASLIRQLMAFSRRQSLQPEAFDVRDRLLGLRLFLDRALRADIGLEFAL 1009

Query: 456  APVPMAVAVDQVQLEMAVLNLVLNARDAMPGGGRIRIAA-------APGPEPRTARIEVS 508
                  V  D VQ ++AVLNL  NARDA+   G + + A         G      ++ V 
Sbjct: 1010 QGGLWPVMADPVQFDLAVLNLATNARDAIDADGAVVVGADNVVLDGMDGLSGEFLKVFVR 1069

Query: 509  DSGAGMPPDVMARAFDPFFTTKGVGKGTGLGLSMVYGFARQSGGSATIDSRPGEGTHVCI 568
            DSG G+ PD + R F+PFFTTK VGKGTGLGL+ VYGF RQSGG+AT++S  G+GT V +
Sbjct: 1070 DSGRGIAPDALGRVFEPFFTTKAVGKGTGLGLAQVYGFCRQSGGTATVESVEGKGTVVSL 1129

Query: 569  DLPLTDARPEEPAPVPAAPVADIRPLRILVVEDNPLVLMATVEGLTQEGFSVETAEDGVT 628
             LP  +A      P     +     + +L+VED+P+V       L   G+ V  A  G  
Sbjct: 1130 LLPRAEATVASETPNAPPVLPSAADIHVLLVEDDPVVAPVVTAALEDLGYRVTRAATGEE 1189

Query: 629  ALALLETDRNFDLVVSDVVMPGGVSGIDLARHIREHWPQLRVLLASGYSPESLATMGADT 688
            AL  LE +   DL+ SDVVMPG ++G+ LA+  R+ WP L +LL +GYS +  AT    +
Sbjct: 1190 ALRRLE-EAAVDLLFSDVVMPGSINGVALAQEARQRWPDLGILLTTGYSEDLAAT---KS 1245

Query: 689  ASVLAKPFTPDQLAVRIRSLTRTG 712
              VL+KP+  + LA  I+     G
Sbjct: 1246 VRVLSKPYRIEDLAHAIQEELEDG 1269



 Score =  114 bits (286), Expect = 2e-29
 Identities = 120/436 (27%), Positives = 178/436 (40%), Gaps = 67/436 (15%)

Query: 338 AEEVRNRERLEEALRQSQKMEALGQLT----GGVAHDFNNLLTAALANLHLLSRHLPADG 393
           A  + N E  EE  R+++ +  L +         +H+F   LT  L  +  + +  PA+ 
Sbjct: 322 ATAITNAEAYEEERRRAEMLAELDRAKTAFFSNASHEFRTPLTLMLGPVEDMLQRSPAED 381

Query: 394 QRFLGGARTALE-------RAEKLTRQLLSFSRQDAVNPTV----VDLGDSLRRMADLLE 442
           +  +   R ALE       R  +L   LL  SR +A         VDL      +A    
Sbjct: 382 RAAVPVERDALELVHRNGQRLLRLVNALLDVSRIEAGRMKARFEPVDLAAFTAELASSFR 441

Query: 443 RSI-RADVVLEWDIAPVPMAVAVDQVQLEMAVLNLVLNARDAMPGGGRIRIAAAPGPEPR 501
            ++ RA +    D  P+P  V +D+   E  VLNL+ NA      GG   +A A  P   
Sbjct: 442 SAMDRAGLDYRIDCPPLPEPVWIDRDLWEKIVLNLISNAFKYTLSGG---VAVAVQPVGE 498

Query: 502 TARIEVSDSGAGMPPDVMARAFDPFFTTKGVG----KGTGLGLSMVYGFARQSGGSATID 557
            A + V D+G G+P +   R FD F   +G      +GTG+GL++V    +  GG+  +D
Sbjct: 499 RAVLTVRDTGVGIPAEEQPRVFDRFHRIEGQSGRTHEGTGIGLALVKDLTQLHGGTVALD 558

Query: 558 SRPGEGTHVCIDLPLTDA------RPEEPAPVPAAPVAD--------------------- 590
           S  G G+   + LP  +A      RP  P P   A  AD                     
Sbjct: 559 SDVGRGSTFTVTLPFGNAHVPATERPAGPIPASTATRADAFVAEALHWLPQEQGEQSAPA 618

Query: 591 -------------IRPLRILVVEDNPLVLMATVEGLTQEGFSVETAEDGVTALALLETDR 637
                        +R   IL+ +DN  +       LT  G+ VET  DGV A+   +   
Sbjct: 619 LVDGASSGPAPERMRNATILLADDNADMRSYVERLLTAAGYRVETVGDGVAAVETAKAAP 678

Query: 638 NFDLVVSDVVMPG-GVSGIDLARHIREHWPQLRVLLASGYSPE--SLATMGADTASVLAK 694
             DLV+SDV+MP     G+  A     H   L ++L S  + E  S+  + A     L K
Sbjct: 679 P-DLVLSDVMMPHLDGFGVIAALRGHPHTRDLPIILLSARAGEESSIEGLQAGADDYLVK 737

Query: 695 PFTPDQLAVRIRSLTR 710
           PF+  +L  R+    R
Sbjct: 738 PFSARELLARVEGALR 753